C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAD homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000143608 smad2-004 ENSDARG00000006389 7955 - 10:14923227-14971855 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005667 IEA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007179 IEA transforming growth factor beta receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025453 Smad2-002 protein_coding Mus_musculus 0 342
ENSMUST00000034973 Smad3-001 protein_coding Mus_musculus 2e-31 143
ENSMUST00000133108 Smad3-004 protein_coding Mus_musculus 2e-26 122
ENSMUST00000137065 Smad3-003 processed_transcript Mus_musculus 1e-17 94
ENSMUST00000154323 Smad3-002 protein_coding Mus_musculus 4e-26 122
ENSMUST00000168423 Smad2-001 protein_coding Mus_musculus 0 342
ENSMUST00000171256 Smad2-005 protein_coding Mus_musculus 0 342
ENST00000262160 SMAD2-001 protein_coding Homo_sapiens 0 357
ENST00000327367 SMAD3-001 protein_coding Homo_sapiens 1e-34 154
ENST00000402690 SMAD2-002 protein_coding Homo_sapiens 0 357
ENST00000439724 SMAD3-003 protein_coding Homo_sapiens 6e-27 126
ENST00000540846 SMAD3-002 protein_coding Homo_sapiens 6e-27 126
ENST00000558739 SMAD3-014 protein_coding Homo_sapiens 2e-27 126
ENST00000558894 SMAD3-013 protein_coding Homo_sapiens 3e-27 126
ENST00000559092 SMAD3-015 protein_coding Homo_sapiens 3e-26 122
ENST00000559460 SMAD3-012 protein_coding Homo_sapiens 2e-27 126
ENST00000559937 SMAD3-010 retained_intron Homo_sapiens 2e-28 130
ENST00000560175 SMAD3-016 protein_coding Homo_sapiens 2e-27 126
ENST00000585978 SMAD2-009 protein_coding Homo_sapiens 0 300
ENST00000586487 SMAD2-010 processed_transcript Homo_sapiens 1e-30 137
ENST00000586514 SMAD2-005 protein_coding Homo_sapiens 0 357
ENST00000587269 SMAD2-008 protein_coding Homo_sapiens 0 357
ENST00000587353 SMAD2-011 processed_transcript Homo_sapiens 1.4013e-45 187
ENST00000587421 SMAD2-007 protein_coding Homo_sapiens 0 327
ENST00000589877 SMAD2-006 protein_coding Homo_sapiens 0 300

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