C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAD homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000128579 smad2-202 ENSDARG00000006389 7955 - 10:14899576-14949560 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSDART00000128579
Transcript ID Brain Liver
ENSDART00000128579 3.745±0.00 0.223±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005667 IEA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007179 IEA transforming growth factor beta receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025453 Smad2-002 protein_coding Mus_musculus 0 1053
ENSMUST00000034973 Smad3-001 protein_coding Mus_musculus 0 656
ENSMUST00000091831 Smad2-003 protein_coding Mus_musculus 0 800
ENSMUST00000113930 Smad2-004 protein_coding Mus_musculus 0 734
ENSMUST00000133108 Smad3-004 protein_coding Mus_musculus 0 248
ENSMUST00000137065 Smad3-003 processed_transcript Mus_musculus 1e-17 94
ENSMUST00000154323 Smad3-002 protein_coding Mus_musculus 0 381
ENSMUST00000168423 Smad2-001 protein_coding Mus_musculus 0 1053
ENSMUST00000171256 Smad2-005 protein_coding Mus_musculus 0 516
ENST00000262160 SMAD2-001 protein_coding Homo_sapiens 0 1009
ENST00000327367 SMAD3-001 protein_coding Homo_sapiens 0 756
ENST00000402690 SMAD2-002 protein_coding Homo_sapiens 0 1009
ENST00000439724 SMAD3-003 protein_coding Homo_sapiens 0 752
ENST00000537194 SMAD3-004 protein_coding Homo_sapiens 0 496
ENST00000540846 SMAD3-002 protein_coding Homo_sapiens 0 752
ENST00000558739 SMAD3-014 protein_coding Homo_sapiens 0 254
ENST00000558763 SMAD3-006 retained_intron Homo_sapiens 0 257
ENST00000558894 SMAD3-013 protein_coding Homo_sapiens 0 444
ENST00000559092 SMAD3-015 protein_coding Homo_sapiens 3e-26 122
ENST00000559460 SMAD3-012 protein_coding Homo_sapiens 0 289
ENST00000559937 SMAD3-010 retained_intron Homo_sapiens 0 315
ENST00000560175 SMAD3-016 protein_coding Homo_sapiens 0 311
ENST00000560424 SMAD3-007 protein_coding Homo_sapiens 0 257
ENST00000585978 SMAD2-009 protein_coding Homo_sapiens 0 294
ENST00000586487 SMAD2-010 processed_transcript Homo_sapiens 1e-30 137
ENST00000586514 SMAD2-005 protein_coding Homo_sapiens 0 449
ENST00000587269 SMAD2-008 protein_coding Homo_sapiens 0 449
ENST00000587353 SMAD2-011 processed_transcript Homo_sapiens 0 285
ENST00000587421 SMAD2-007 protein_coding Homo_sapiens 0 322
ENST00000589877 SMAD2-006 protein_coding Homo_sapiens 0 294

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