C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: aggrecan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559004 ACAN-008 ENSG00000157766 9606 + 15:88803759-88874572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartMusclePlacentaENST00000559004
Transcript ID Breast Heart Muscle Placenta
ENST00000559004 0.068±0.00 0.001±0.00 0.071±0.00 0.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011K CIL_00011K_0001 CGP 15:88636153-88875354
CIL_00011L CIL_00011L_0001 CGP 15:88803443-88895626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005540 IEA hyaluronic acid binding
GO:0007155 IEA cell adhesion
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032835 Acan-201 protein_coding Mus_musculus 0 2289

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