C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cancer susceptibility candidate 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559151 CASC4-010 ENSG00000166734 9606 + 15:44406330-44409847 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000559151
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000559151 0.195±0.00 1.008±0.00 0.054±0.00 0.411±0.26 0.432±0.22 0.525±0.16 0.413±0.33 0.623±0.00 0.400±0.16 0.304±0.24 0.261±0.15 0.215±0.10 0.290±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000687 CIL_000687_0001 CGP 15:43870761-44415758
CIL_0004QJ CIL_0004QJ_0002 CGP 15:44288729-44529038

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.000004 57
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.000004 57

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