C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAR-related orphan receptor A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559343 RORA-009 ENSG00000069667 9606 - 15:60511592-60593126 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LQ CIL_0007LQ_0001 UCNEbase 15:59905203-60532122

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113624 Rora-002 protein_coding Mus_musculus 0 381
ENSMUST00000034766 Rora-001 protein_coding Mus_musculus 0 381
ENSMUST00000174296 Rora-006 nonsense_mediated_decay Mus_musculus 0 379
ENSDART00000121449 roraa-201 protein_coding Danio_rerio 0 233
ENSDART00000148537 roraa-001 protein_coding Danio_rerio 0 230

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