C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group 20A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559728 HMG20A-008 ENSG00000140382 9606 + 15:77478123-77483419 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryENST00000559728
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000559728 4.813±0.00 1.680±0.00 3.222±0.00 2.410±0.00 1.152±0.00 1.762±0.00 3.208±0.74 2.929±0.00 1.150±0.00 3.301±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UO CIL_0001UO_0001 CGP 15:77100656-77485607
CIL_0003SZ CIL_0003SZ_0001 CGP 15:77420412-77820900

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034879 Hmg20a-201 protein_coding Mus_musculus 0 577

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