C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173517-ENSG00000140382 CGP 9606 15:77100656-77485607
GeneTranscriptPositionBiotype
ENSG00000140382 (HMG20A)
high mobility group 20A 		ENST00000336216 (HMG20A-001) 77420651-77485607 protein_coding
ENST00000381714 (HMG20A-002) 77420674-77485603 protein_coding
ENST00000558176 (HMG20A-011) 77420921-77467274 protein_coding
ENST00000558288 (HMG20A-006) 77482050-77485607 retained_intron
ENST00000558651 (HMG20A-012) 77420722-77467284 protein_coding
ENST00000558845 (HMG20A-009) 77478293-77479604 protein_coding
ENST00000559035 (HMG20A-014) 77420902-77471003 nonsense_mediated_decay
ENST00000559099 (HMG20A-015) 77421011-77470929 protein_coding
ENST00000559728 (HMG20A-008) 77478123-77483419 retained_intron
ENST00000560498 (HMG20A-007) 77420412-77467158 protein_coding
ENST00000560867 (HMG20A-013) 77458217-77470946 protein_coding
ENST00000560986 (HMG20A-010) 77420935-77464823 retained_intron
ENSG00000173517 (PEAK1)
pseudopodium-enriched atypical kinase 1 		ENST00000312493 (PEAK1-201) 77108164-77252531 protein_coding
ENST00000558305 (PEAK1-005) 77177819-77420122 protein_coding
ENST00000559791 (PEAK1-004) 77177856-77179147 processed_transcript
ENST00000560626 (PEAK1-001) 77100656-77420144 protein_coding
ENST00000560854 (PEAK1-003) 77155200-77179808 retained_intron
ENST00000564328 (PEAK1-006) 77179958-77420100 protein_coding
ENST00000565820 (PEAK1-012) 77181747-77255552 protein_coding
ENST00000567337 (PEAK1-013) 77252422-77420104 processed_transcript
ENST00000567808 (PEAK1-011) 77181979-77420100 processed_transcript
ENST00000569159 (PEAK1-014) 77252499-77420094 processed_transcript
ENST00000569692 (PEAK1-010) 77283762-77285100 processed_transcript
ENST00000569819 (PEAK1-009) 77252479-77346631 processed_transcript
ENSG00000230459 (RP11-741G21.1)
 ENST00000421698 (RP11-741G21.1-001) 77278465-77278774 processed_pseudogene
ENSG00000259722 (RP11-94P14.1)
 ENST00000560574 (RP11-94P14.1-001) 77204578-77205100 processed_pseudogene
ENSG00000279033 (RP11-500C12.1)
 ENST00000623172 (RP11-500C12.1-001) 77484275-77485606 TEC
CIL_0001UO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074305-ENSMUSG00000032329 CGP 10090 9:56201126-56496884
GeneTranscriptPositionBiotype
ENSMUSG00000032329 (Hmg20a)
high mobility group 20A 		ENSMUST00000034879 (Hmg20a-201) 56418644-56496884 protein_coding
ENSMUSG00000074305 (Peak1)
pseudopodium-enriched atypical kinase 1 		ENSMUST00000061552 (Peak1-001) 56205129-56418067 protein_coding
ENSMUST00000185775 (Peak1-003) 56416699-56418050 retained_intron
ENSMUST00000186735 (Peak1-004) 56260557-56418042 protein_coding
ENSMUST00000188142 (Peak1-002) 56201126-56244065 protein_coding
ENSMUSG00000099543 (RP23-456B7.4)
predicted gene 29322 		ENSMUST00000185378 (RP23-456B7.4-001) 56239285-56240751 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UO_0001ENSG00000140382ENST00000336216ENST00000381714ENST00000558176ENST00000558288ENST00000558651ENST00000558845ENST00000559035ENST00000559099ENST00000559728ENST00000560498ENST00000560867ENST00000560986ENSG00000173517ENST00000312493ENST00000558305ENST00000559791ENST00000560626ENST00000560854ENST00000564328ENST00000565820ENST00000567337ENST00000567808ENST00000569159ENST00000569692ENST00000569819ENSG00000230459ENST00000421698ENSG00000259722ENST00000560574ENSG00000279033ENST00000623172CIL_0001UO_0002ENSMUSG00000032329ENSMUST00000034879ENSMUSG00000074305ENSMUST00000061552ENSMUST00000185775ENSMUST00000186735ENSMUST00000188142ENSMUSG00000099543ENSMUST00000185378
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UO_0001ENSG00000140382ENST00000336216ENST00000381714ENST00000558288ENST00000559728ENST00000560867ENSG00000173517ENST00000312493ENST00000560854ENST00000564328ENSG00000230459ENST00000421698ENSG00000259722ENST00000560574ENSG00000279033ENST00000623172CIL_0001UO_0002ENSMUSG00000032329ENSMUST00000034879ENSMUSG00000074305ENSMUST00000061552ENSMUST00000188142ENSMUSG00000099543ENSMUST00000185378
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140382 ENST00000336216 2.147±0.00 N/A N/A 1.436±0.00 2.177±0.00 0.811±0.25 0.253±0.00 1.854±0.00 0.851±0.00 N/A 0.405±0.23 2.156±1.12 2.556±0.22 3.660±0.00
ENST00000381714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.215±0.00 N/A 2.773±0.00
ENST00000558176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558288 N/A N/A N/A 0.725±0.00 0.973±0.01 N/A 0.298±0.00 N/A N/A 0.755±0.00 N/A 0.635±0.00 N/A N/A
ENST00000558651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559728 4.813±0.00 N/A 1.680±0.00 N/A 3.222±0.00 2.410±0.00 1.152±0.00 1.762±0.00 3.208±0.74 2.929±0.00 1.150±0.00 3.301±0.00 N/A N/A
ENST00000560498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560867 N/A N/A 2.492±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173517 ENST00000312493 10.104±0.00 5.814±0.00 2.660±0.00 4.088±0.83 6.905±0.76 4.638±0.16 3.804±2.52 2.006±0.57 3.646±2.93 7.793±1.34 1.711±0.80 3.584±0.66 3.870±0.28 6.046±1.05
ENST00000558305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.510±0.00 3.292±0.00 6.255±0.00
ENST00000564328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.035±0.00 N/A N/A N/A
ENST00000565820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230459 ENST00000421698 N/A N/A N/A 0.149±0.00 N/A N/A 0.156±0.00 N/A 0.434±0.00 N/A N/A 0.053±0.00 N/A 0.105±0.00
ENSG00000259722 ENST00000560574 N/A N/A N/A 0.644±0.00 N/A N/A 0.163±0.00 N/A N/A N/A N/A 0.059±0.00 N/A N/A
ENSG00000279033 ENST00000623172 5.267±0.00 10.571±0.00 N/A 7.158±5.50 N/A 2.533±1.54 3.610±2.96 1.152±0.00 4.065±0.00 N/A N/A 2.595±1.35 6.684±2.44 10.664±4.77
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032329 ENSMUST00000034879 14.840±4.24 17.886±2.88 12.183±1.08 27.384±5.64 12.670±4.62 9.962±1.52 7.512±0.39 11.171±1.35 5.368±1.97 15.250±1.08 3.383±0.67 25.005±6.78 9.677±0.96 3.248±0.90
ENSMUSG00000074305 ENSMUST00000061552 1.476±0.00 1.423±0.00 1.566±0.00 N/A 1.296±0.21 0.744±0.11 N/A N/A 0.396±0.00 2.270±0.11 1.192±0.00 2.604±0.25 0.839±0.02 0.617±0.28
ENSMUST00000185775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188142 6.047±0.72 8.105±0.83 3.677±2.27 0.548±0.30 5.352±1.01 2.616±1.29 2.192±0.86 2.171±0.13 0.892±0.36 9.434±0.64 0.809±0.56 7.195±3.13 1.597±0.71 1.471±0.27
ENSMUSG00000099543 ENSMUST00000185378 N/A N/A 0.054±0.04 0.035±0.01 N/A N/A 0.076±0.00 N/A 0.037±0.01 N/A N/A 0.107±0.00 0.085±0.05 N/A

Loading