C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: papilin, proteoglycan-like sulfated glycoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559759 PAPLN-014 ENSG00000100767 9606 + 14:73262500-73274620 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000559759
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000559759 0.758±0.00 13.083±0.00 1.806±0.00 1.375±0.00 2.394±0.00 0.379±0.04 9.515±0.00 2.220±0.00 0.507±0.00 5.197±1.07 2.060±1.43 4.309±2.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0001 VISTA 14:72878760-73482269
CIL_0001TQ CIL_0001TQ_0001 CGP 14:73136418-73274640
CIL_0001TR CIL_0001TR_0001 CGP 14:73237497-73463642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021646 Papln-002 protein_coding Mus_musculus 0 209
ENSMUST00000121733 Papln-001 protein_coding Mus_musculus 0 209
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00002 57

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