C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histidine decarboxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559816 HDC-005 ENSG00000140287 9606 - 15:50241947-50253305 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000559816
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000559816 0.146±0.00 1.600±0.00 0.129±0.00 0.233±0.05 0.026±0.01 0.032±0.00 0.231±0.00 4.635±0.00 0.280±0.00 0.678±0.00 0.056±0.04 0.514±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E7 CIL_0002E7_0001 CGP 15:50182196-50266026
CIL_0002E6 CIL_0002E6_0001 CGP 15:50241947-50355408

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028838 Hdc-001 protein_coding Mus_musculus 0 1149
ENSMUST00000124396 Hdc-004 processed_transcript Mus_musculus 0 403
ENSMUST00000138752 Hdc-002 retained_intron Mus_musculus 0 326
ENSDART00000149810 hdc-001 protein_coding Danio_rerio 4e-35 154
ENSDART00000149321 hdc-002 protein_coding Danio_rerio 1e-34 152

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