C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559968 RP11-643G16.4-002 ENSG00000259648 9606 + 14:67614929-67616626 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000559968
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000559968 0.073±0.00 0.084±0.00 0.060±0.00 0.054±0.00 0.051±0.00 0.062±0.00 0.010±0.00 0.048±0.00 0.015±0.00 0.022±0.00 0.332±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CL CIL_0002CL_0001 CGP 14:67581955-67651720

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085546 Hmgb1-001 protein_coding Mus_musculus 0 891
ENSMUST00000178049 Gm21596-201 processed_pseudogene Mus_musculus 0 867
ENSMUST00000110505 Hmgb1-003 protein_coding Mus_musculus 0 795
ENSMUST00000093196 Hmgb1-002 protein_coding Mus_musculus 0 617
ENSMUST00000155154 Ppm1e-002 processed_transcript Mus_musculus 1.99965e-42 178

Loading