C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100564-ENSG00000081181 CGP 9606 14:67581955-67651720
GeneTranscriptPositionBiotype
ENSG00000054690 (PLEKHH1)
pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 		ENST00000329153 (PLEKHH1-001) 67533301-67589612 protein_coding
ENST00000557971 (PLEKHH1-004) 67571063-67589440 retained_intron
ENST00000558214 (PLEKHH1-015) 67586411-67589533 retained_intron
ENST00000558296 (PLEKHH1-017) 67579294-67580307 retained_intron
ENST00000558366 (PLEKHH1-010) 67580895-67585602 retained_intron
ENST00000558386 (PLEKHH1-002) 67569033-67587681 retained_intron
ENST00000558981 (PLEKHH1-003) 67570468-67575599 retained_intron
ENST00000559168 (PLEKHH1-012) 67586016-67589231 nonsense_mediated_decay
ENST00000559766 (PLEKHH1-011) 67585116-67585984 retained_intron
ENST00000559832 (PLEKHH1-016) 67585991-67586911 processed_transcript
ENST00000559981 (PLEKHH1-006) 67581586-67589611 retained_intron
ENST00000560100 (PLEKHH1-009) 67579429-67582157 retained_intron
ENST00000561057 (PLEKHH1-013) 67584111-67587366 nonsense_mediated_decay
ENST00000561135 (PLEKHH1-014) 67571788-67573376 retained_intron
ENST00000561370 (PLEKHH1-007) 67578563-67587548 nonsense_mediated_decay
ENST00000561456 (PLEKHH1-008) 67569739-67573302 retained_intron
ENSG00000100564 (PIGH)
phosphatidylinositol glycan anchor biosynthesis, class H 		ENST00000216452 (PIGH-001) 67589311-67600287 protein_coding
ENST00000558001 (PIGH-005) 67590127-67600282 nonsense_mediated_decay
ENST00000558198 (PIGH-007) 67590037-67600265 nonsense_mediated_decay
ENST00000558493 (PIGH-009) 67589993-67600132 protein_coding
ENST00000558987 (PIGH-004) 67589714-67593918 protein_coding
ENST00000559097 (PIGH-002) 67593254-67600286 retained_intron
ENST00000559118 (PIGH-011) 67589755-67592776 retained_intron
ENST00000559415 (PIGH-003) 67592404-67600268 protein_coding
ENST00000559581 (PIGH-006) 67591809-67600267 protein_coding
ENST00000560722 (PIGH-010) 67589806-67600268 protein_coding
ENST00000561272 (PIGH-012) 67581955-67600169 protein_coding
ENST00000561303 (PIGH-008) 67590112-67600246 nonsense_mediated_decay
ENSG00000100568 (VTI1B)
vesicle transport through interaction with t-SNAREs 1B 		ENST00000216456 (VTI1B-002) 67651264-67674610 nonsense_mediated_decay
ENST00000553619 (VTI1B-004) 67656480-67660194 retained_intron
ENST00000554636 (VTI1B-006) 67651152-67659791 protein_coding
ENST00000554659 (VTI1B-001) 67647075-67674831 protein_coding
ENST00000555543 (VTI1B-003) 67656510-67674820 nonsense_mediated_decay
ENST00000556461 (VTI1B-005) 67651261-67659845 protein_coding
ENSG00000201529 (Y_RNA)
Y RNA 		ENST00000364659 (Y_RNA.1-465) 67617302-67617415 misc_RNA
ENSG00000259502 (RP11-643G16.3)
 ENST00000559594 (RP11-643G16.3-001) 67610986-67613864 processed_pseudogene
ENSG00000259648 (RP11-643G16.4)
 ENST00000559732 (RP11-643G16.4-001) 67615484-67616097 transcribed_processed_pseudogene
ENST00000559968 (RP11-643G16.4-002) 67614929-67616626 processed_transcript
CIL_0002CL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021120-ENSMUSG00000021125 CGP 10090 12:79080673-79156301
GeneTranscriptPositionBiotype
ENSMUSG00000021120 (Pigh)
phosphatidylinositol glycan anchor biosynthesis, class H 		ENSMUST00000072154 (Pigh-201) 79080673-79089670 protein_coding
ENSMUSG00000021124 (Vti1b)
vesicle transport through interaction with t-SNAREs 1B 		ENSMUST00000055262 (Vti1b-001) 79156017-79172667 protein_coding
ENSMUST00000162569 (Vti1b-004) 79156329-79165139 protein_coding
ENSMUST00000162789 (Vti1b-002) 79156170-79172448 nonsense_mediated_decay
ENSMUST00000163031 (Vti1b-003) 79156517-79166368 nonsense_mediated_decay
ENSMUSG00000021125 (Arg2)
arginase type II 		ENSMUST00000021550 (Arg2-001) 79130777-79156301 protein_coding
ENSMUSG00000060716 (Plekhh1)
pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 		ENSMUST00000039928 (Plekhh1-201) 79029163-79081648 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CL_0001ENSG00000054690ENST00000329153ENST00000557971ENST00000558214ENST00000558386ENST00000559981ENSG00000100564ENST00000216452ENST00000558001ENST00000558493ENST00000560722ENSG00000100568ENST00000216456ENST00000553619ENST00000554636ENST00000554659ENST00000555543ENSG00000201529ENST00000364659ENSG00000259502ENST00000559594ENSG00000259648ENST00000559732ENST00000559968CIL_0002CL_0002ENSMUSG00000021120ENSMUST00000072154ENSMUSG00000021124ENSMUST00000055262ENSMUST00000162569ENSMUST00000162789ENSMUSG00000021125ENSMUST00000021550ENSMUSG00000060716ENSMUST00000039928
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054690 ENST00000329153 N/A N/A N/A 8.304±3.56 0.855±0.32 0.457±0.00 0.350±0.27 1.732±0.00 N/A N/A N/A 1.564±0.00 0.495±0.00 1.007±0.41
ENST00000557971 N/A N/A N/A 8.928±0.00 N/A N/A N/A N/A N/A N/A N/A 1.568±0.28 0.276±0.00 0.732±0.00
ENST00000558214 N/A N/A N/A 9.152±0.00 1.659±0.00 1.281±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558386 N/A N/A N/A N/A 1.719±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559981 N/A N/A N/A N/A N/A 1.019±0.00 0.138±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100564 ENST00000216452 4.599±0.00 11.949±0.00 N/A 21.338±0.00 6.445±0.00 5.522±0.00 2.706±2.42 18.162±0.00 7.262±0.00 N/A 4.844±3.21 12.987±2.66 5.944±3.09 10.834±8.63
ENST00000558001 N/A N/A 5.848±0.00 N/A N/A N/A N/A N/A N/A 3.635±0.00 N/A N/A N/A N/A
ENST00000558198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558493 N/A N/A N/A N/A N/A N/A N/A 2.357±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560722 N/A N/A N/A N/A N/A N/A N/A 1.644±0.00 N/A N/A N/A N/A 2.204±0.00 7.731±0.00
ENST00000561272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100568 ENST00000216456 37.049±0.00 26.490±0.00 N/A 52.872±0.00 54.469±0.00 37.264±0.00 14.073±11.26 N/A N/A N/A N/A 26.111±3.67 23.240±7.72 34.939±5.22
ENST00000553619 N/A N/A N/A N/A N/A N/A 11.342±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000554636 42.906±0.00 38.383±0.00 N/A N/A 73.133±0.00 40.903±0.00 N/A N/A N/A N/A 33.944±0.00 42.315±0.00 44.714±13.48 66.283±18.68
ENST00000554659 8.731±0.00 5.620±0.00 5.643±0.00 9.078±0.05 9.885±4.49 6.071±0.47 5.129±2.38 13.566±7.58 4.904±0.56 5.459±0.27 5.570±0.22 5.450±1.56 6.838±1.16 5.076±0.18
ENST00000555543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.442±0.00 N/A N/A N/A
ENST00000556461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201529 ENST00000364659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.688±0.00
ENSG00000259502 ENST00000559594 N/A 0.213±0.00 0.505±0.00 N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A 0.358±0.12
ENSG00000259648 ENST00000559732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A 0.027±0.00 1.824±0.00
ENST00000559968 0.073±0.00 N/A 0.084±0.00 0.060±0.00 0.054±0.00 0.051±0.00 N/A 0.062±0.00 0.010±0.00 0.048±0.00 N/A 0.015±0.00 0.022±0.00 0.332±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021120 ENSMUST00000072154 7.067±2.17 30.249±5.46 23.532±1.89 5.302±1.44 11.233±7.06 19.134±1.66 2.240±0.15 10.945±3.03 3.224±0.36 12.905±3.85 0.910±0.24 19.868±9.36 21.614±9.06 2.452±0.93
ENSMUSG00000021124 ENSMUST00000055262 12.072±1.17 N/A 40.383±1.72 30.231±8.88 6.993±1.27 12.244±3.01 11.106±0.82 11.135±2.99 7.071±4.21 11.694±2.34 16.598±3.04 9.264±7.32 27.608±3.35 11.130±3.25
ENSMUST00000162569 N/A N/A N/A 128.111±0.00 14.382±0.00 N/A 6.358±0.00 N/A N/A N/A 10.273±1.00 39.781±4.15 50.478±8.08 N/A
ENSMUST00000162789 8.995±2.47 48.714±19.42 10.244±0.00 8.196±0.50 13.962±6.80 31.485±6.24 9.885±3.31 19.104±3.14 11.331±6.99 15.985±2.90 12.218±1.74 12.239±7.09 7.823±1.75 4.012±0.00
ENSMUST00000163031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021125 ENSMUST00000021550 3.835±0.12 N/A 10.711±1.77 6.308±0.44 5.857±1.58 N/A N/A 12.056±3.01 N/A 3.492±0.43 N/A 5.165±2.01 N/A 3.478±0.00
ENSMUSG00000060716 ENSMUST00000039928 3.260±0.06 1.181±0.31 6.847±0.16 1.983±0.27 2.600±0.83 17.312±2.13 0.482±0.10 1.665±0.72 0.165±0.07 3.157±1.06 0.163±0.05 5.379±1.65 29.970±12.62 0.976±0.44

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