Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	SMAD family member 3
ENST00000560175	SMAD3-016	ENSG00000166949	9606	+	15:67098679-67170604	protein_coding

Expression Patterns

No expression data.

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008R9	CIL_0008R9_0001	VISTA	15:66606636-67207796
CIL_000471	CIL_000471_0002	CGP	15:66702228-67195195
CIL_0007L5	CIL_0007L5_0001	UCNEbase	15:66906943-67787880
CIL_00046Z	CIL_00046Z_0002	CGP	15:67063763-67255195

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003700	IEA	sequence-specific DNA binding transcription factor activity
GO:0005622	IEA	intracellular
GO:0005667	IEA	transcription factor complex
GO:0006355	IEA	regulation of transcription, DNA-templated
GO:0007179	IEA	transforming growth factor beta receptor signaling pathway

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000034973	Smad3-001	protein_coding	Mus_musculus	0	662
ENSMUST00000154323	Smad3-002	protein_coding	Mus_musculus	0	658
ENSMUST00000133108	Smad3-004	protein_coding	Mus_musculus	0	579
ENSDART00000128579	smad2-202	protein_coding	Danio_rerio	0	311
ENSDART00000044756	smad2-201	protein_coding	Danio_rerio	0	311
ENSDART00000147653	smad2-002	protein_coding	Danio_rerio	0	311
ENSDART00000121892	smad2-001	protein_coding	Danio_rerio	0	311
ENSMUST00000137713	Smad3-005	protein_coding	Mus_musculus	0	213
ENSMUST00000137065	Smad3-003	processed_transcript	Mus_musculus	3e-36	156
ENSDART00000143608	smad2-004	protein_coding	Danio_rerio	2e-27	126

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