C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger E-box binding homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560196 ZEB1-007 ENSG00000148516 9606 + 10:31318783-31502447 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R6 CIL_0000R6_0001 CGP 10:30820207-31529814
CIL_0000R1 CIL_0000R1_0001 CGP 10:31318495-31928876

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177070 Zeb1-011 processed_transcript Mus_musculus 0 424
ENSMUST00000161295 Zeb1-007 nonsense_mediated_decay Mus_musculus 0 375
ENSMUST00000175925 Zeb1-010 nonsense_mediated_decay Mus_musculus 0 278
ENSMUST00000160910 Zeb1-006 protein_coding Mus_musculus 0 233
ENSMUST00000162892 Zeb1-009 retained_intron Mus_musculus 0 230
ENSMUST00000159477 Zeb1-005 processed_transcript Mus_musculus 2e-34 150
ENSMUST00000177030 Zeb1-003 processed_transcript Mus_musculus 5e-21 106
ENSMUST00000025081 Zeb1-001 protein_coding Mus_musculus 2e-20 104
ENSDART00000136077 zeb1a-003 protein_coding Danio_rerio 0.0000001 62
ENSDART00000146493 zeb1a-001 protein_coding Danio_rerio 0.0000001 62

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