C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger E-box binding homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177030 Zeb1-003 ENSMUSG00000024238 10090 + 18:5731081-5772804 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastOvaryPlacentaTestisENSMUST00000177030
Transcript ID Adrenal Brain Breast Ovary Placenta Testis
ENSMUST00000177030 2.502±0.40 15.363±0.00 2.104±0.00 4.755±3.57 1.583±0.59 2.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R6 CIL_0000R6_0002 CGP 18:5210031-5775467
CIL_0000R1 CIL_0000R1_0002 CGP 18:5591860-6136098

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000047724 zeb1b-001 protein_coding Danio_rerio 0 265
ENST00000320985 ZEB1-018 protein_coding Homo_sapiens 0 2303
ENST00000361642 ZEB1-201 protein_coding Homo_sapiens 0 2303
ENST00000424869 ZEB1-004 protein_coding Homo_sapiens 0 538
ENST00000437844 ZEB1-001 nonsense_mediated_decay Homo_sapiens 0 2303
ENST00000446923 ZEB1-202 protein_coding Homo_sapiens 0 2303
ENST00000488625 ZEB1-005 retained_intron Homo_sapiens 0 2303
ENST00000515048 ZEB2P1-001 transcribed_processed_pseudogene Homo_sapiens 0 189
ENST00000542815 ZEB1-016 protein_coding Homo_sapiens 0 2303
ENST00000542879 ZEB1-017 retained_intron Homo_sapiens 0 2303
ENST00000557827 ZEB1-013 retained_intron Homo_sapiens 0 483
ENST00000558440 ZEB1-003 protein_coding Homo_sapiens 0 363
ENST00000558655 ZEB1-009 retained_intron Homo_sapiens 0 1818
ENST00000558863 ZEB1-019 retained_intron Homo_sapiens 0 699
ENST00000559476 ZEB1-012 protein_coding Homo_sapiens 0 538
ENST00000559496 ZEB1-011 retained_intron Homo_sapiens 0 483
ENST00000559858 ZEB1-015 processed_transcript Homo_sapiens 0 1818
ENST00000560196 ZEB1-007 retained_intron Homo_sapiens 5e-21 106
ENST00000560721 ZEB1-002 protein_coding Homo_sapiens 0 2303
ENST00000561061 ZEB1-010 processed_transcript Homo_sapiens 0 534
ENST00000561212 ZEB1-020 protein_coding Homo_sapiens 0 699
ENST00000561304 ZEB1-008 retained_intron Homo_sapiens 0 503
ENST00000606161 ZEB1-022 processed_transcript Homo_sapiens 0.000000001 68
ENST00000606671 ZEB1-024 processed_transcript Homo_sapiens 0.0000000000006 79

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