C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide A'
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560433 SNRPA1-005 ENSG00000131876 9606 - 15:101281515-101288448 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLungOvaryENST00000560433
Transcript ID Adrenal Brain Breast Colon Heart Lung Ovary
ENST00000560433 2.764±0.00 1.275±0.00 0.580±0.00 0.584±0.00 0.323±0.25 1.854±0.00 1.322±0.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139082 Snrpa1-003 retained_intron Mus_musculus 0 819
ENSMUST00000153609 Snrpa1-001 protein_coding Mus_musculus 0 375
ENSMUST00000032723 Snrpa1-002 nonsense_mediated_decay Mus_musculus 0 374

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