C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synemin, intermediate filament protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560674 SYNM-003 ENSG00000182253 9606 + 15:99098217-99135593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000560674
Transcript ID Muscle
ENST00000560674 7.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CO CIL_0009CO_0001 VISTA 15:98550452-99154111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051389 Synm-201 protein_coding Mus_musculus 0 1639
ENSMUST00000074233 Synm-202 protein_coding Mus_musculus 0 1517

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