C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein associated with topoisomerase II homolog 2 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560775 PATL2-001 ENSG00000229474 9606 - 15:44665732-44676550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonOvaryPlacentaTestisENST00000560775
Transcript ID Adipose Adrenal Bladder Breast Colon Ovary Placenta Testis
ENST00000560775 0.037±0.00 1.750±0.00 0.118±0.00 0.059±0.00 0.073±0.03 0.305±0.17 0.075±0.02 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DJ CIL_0004DJ_0001 CGP 15:44562696-44711316
CIL_0004DK CIL_0004DK_0001 CGP 15:44665732-44718877

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0017148 ISS negative regulation of translation
GO:0030529 ISS ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028665 Patl2-001 protein_coding Mus_musculus 0 1033

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