C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aggrecan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561243 ACAN-006 ENSG00000157766 9606 + 15:88836207-88874481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLungMuscleOvaryPlacentaENST00000561243
Transcript ID Adipose Brain Heart Lung Muscle Ovary Placenta
ENST00000561243 0.040±0.00 0.051±0.00 0.002±0.00 0.405±0.00 0.117±0.00 0.088±0.00 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011K CIL_00011K_0001 CGP 15:88636153-88875354
CIL_00011L CIL_00011L_0001 CGP 15:88803443-88895626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005540 IEA hyaluronic acid binding
GO:0007155 IEA cell adhesion
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032835 Acan-201 protein_coding Mus_musculus 0 2220

Loading