C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000561419  |
RP11-468E2.2-001 |
ENSG00000259522 |
9606 | - |
14:24180395-24190416  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00028R | CIL_00028R_0001 | CGP | 14:24171853-24188964 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000156420
|
Ipo4-013 | processed_transcript | Mus_musculus | 0 | 2963 |
|
ENSMUST00000047131
|
Ipo4-001 | protein_coding | Mus_musculus | 0 | 2955 |
|
ENSMUST00000135221
|
Ipo4-002 | nonsense_mediated_decay | Mus_musculus | 0 | 2206 |
|
ENSMUST00000148351
|
Ipo4-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1881 |
|
ENSMUST00000122358
|
Tm9sf1-001 | protein_coding | Mus_musculus | 0 | 795 |
|
ENSMUST00000120041
|
Tm9sf1-004 | protein_coding | Mus_musculus | 0 | 795 |
|
ENSMUST00000121791
|
Tm9sf1-008 | protein_coding | Mus_musculus | 0 | 754 |
|
ENSMUST00000149726
|
Tm9sf1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 747 |
|
ENSMUST00000121937
|
Tm9sf1-003 | protein_coding | Mus_musculus | 0 | 732 |
|
ENSMUST00000002391
|
Tm9sf1-002 | protein_coding | Mus_musculus | 0 | 693 |
|
ENSMUST00000125133
|
Ipo4-004 | retained_intron | Mus_musculus | 0 | 401 |
|
ENSMUST00000148942
|
Ipo4-005 | retained_intron | Mus_musculus | 0 | 370 |
|
ENSMUST00000150951
|
Ipo4-006 | retained_intron | Mus_musculus | 0 | 335 |
