C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: importin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135221 Ipo4-002 ENSMUSG00000002319 10090 - 14:55625740-55635957 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000135221
Transcript ID Muscle
ENSMUST00000135221 7.303±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028R CIL_00028R_0002 CGP 14:55618037-55637895

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006610 ISA ribosomal protein import into nucleus
GO:0008536 IEA Ran GTPase binding
GO:0042254 ISA ribosome biogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354464 IPO4-001 protein_coding Homo_sapiens 0 2206
ENST00000558046 IPO4-009 nonsense_mediated_decay Homo_sapiens 0 2061
ENST00000558193 IPO4-021 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000558718 IPO4-016 retained_intron Homo_sapiens 0 326
ENST00000558780 IPO4-004 nonsense_mediated_decay Homo_sapiens 0 2132
ENST00000559253 IPO4-018 nonsense_mediated_decay Homo_sapiens 2.00386e-43 180
ENST00000559588 IPO4-002 retained_intron Homo_sapiens 0 2119
ENST00000559635 IPO4-017 retained_intron Homo_sapiens 5.00264e-43 178
ENST00000560155 IPO4-003 nonsense_mediated_decay Homo_sapiens 0 2206
ENST00000560798 IPO4-011 retained_intron Homo_sapiens 0 2047
ENST00000561090 IPO4-010 retained_intron Homo_sapiens 0 2095
ENST00000561199 IPO4-008 retained_intron Homo_sapiens 0 1310
ENST00000561419 RP11-468E2.2-001 nonsense_mediated_decay Homo_sapiens 0 2206

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