C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tubulin, gamma complex associated protein 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000561691  |
TUBGCP4-003 |
ENSG00000137822 |
9606 | + |
15:43376540-43405319  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005YG | CIL_0005YG_0001 | CGP | 15:43330674-43371025 |
| CIL_0005YH | CIL_0005YH_0001 | CGP | 15:43358172-43409771 |
| CIL_0005YA | CIL_0005YA_0001 | CGP | 15:43369221-43510728 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000226 | IEA | microtubule cytoskeleton organization |
| GO:0000922 | IEA | spindle pole |
| GO:0005815 | IEA | microtubule organizing center |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000144076
|
Tubgcp4-004 | retained_intron | Mus_musculus | 0 | 1559 |
|
ENSMUST00000039541
|
Tubgcp4-001 | protein_coding | Mus_musculus | 0 | 1559 |
|
ENSMUST00000186659
|
Tubgcp4-201 | protein_coding | Mus_musculus | 0 | 1539 |
|
ENSMUST00000110657
|
Tubgcp4-006 | protein_coding | Mus_musculus | 0 | 1539 |
|
ENSMUST00000138601
|
Tubgcp4-003 | retained_intron | Mus_musculus | 0 | 1539 |
|
ENSMUST00000110658
|
Tubgcp4-002 | protein_coding | Mus_musculus | 0 | 1539 |
|
ENSMUST00000154633
|
Tubgcp4-005 | retained_intron | Mus_musculus | 0 | 1007 |
|
ENSMUST00000143305
|
Tubgcp4-007 | retained_intron | Mus_musculus | 0 | 815 |
|
ENSMUST00000154318
|
Tubgcp4-014 | retained_intron | Mus_musculus | 0 | 785 |
|
ENSMUST00000144123
|
Tubgcp4-008 | processed_transcript | Mus_musculus | 0 | 743 |
|
ENSMUST00000135555
|
Tubgcp4-010 | processed_transcript | Mus_musculus | 0 | 628 |
|
ENSMUST00000133773
|
Tubgcp4-009 | processed_transcript | Mus_musculus | 0 | 547 |
|
ENSDART00000009649
|
tubgcp4-201 | protein_coding | Danio_rerio | 0 | 492 |
|
ENSMUST00000126817
|
Tubgcp4-013 | retained_intron | Mus_musculus | 0 | 388 |
|
ENSMUST00000143320
|
Tubgcp4-012 | retained_intron | Mus_musculus | 0 | 320 |
|
ENSMUST00000110648
|
Trp53bp1-001 | protein_coding | Mus_musculus | 0 | 202 |
|
ENSMUST00000110647
|
Trp53bp1-002 | protein_coding | Mus_musculus | 0 | 202 |
|
ENSMUST00000130929
|
Tubgcp4-011 | processed_transcript | Mus_musculus | 0 | 193 |
