C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005YH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140265-ENSG00000137822 CGP 9606 15:43358172-43409771
GeneTranscriptPositionBiotype
ENSG00000137822 (TUBGCP4)
tubulin, gamma complex associated protein 4
ENST00000260383 (TUBGCP4-001) 43371101-43405573 protein_coding
ENST00000561691 (TUBGCP4-003) 43376540-43405319 nonsense_mediated_decay
ENST00000562053 (TUBGCP4-009) 43397210-43398383 retained_intron
ENST00000563147 (TUBGCP4-011) 43398130-43405544 protein_coding
ENST00000563412 (TUBGCP4-008) 43377892-43385916 nonsense_mediated_decay
ENST00000563517 (TUBGCP4-006) 43371073-43377903 nonsense_mediated_decay
ENST00000563963 (TUBGCP4-004) 43394081-43405323 retained_intron
ENST00000564079 (TUBGCP4-002) 43371115-43409771 protein_coding
ENST00000564511 (TUBGCP4-007) 43377598-43383504 retained_intron
ENST00000565548 (TUBGCP4-012) 43401806-43407060 protein_coding
ENST00000566251 (TUBGCP4-010) 43401818-43405328 nonsense_mediated_decay
ENST00000570081 (TUBGCP4-005) 43369221-43376624 processed_transcript
ENSG00000243871 (RN7SL487P)
RNA, 7SL, cytoplasmic 487, pseudogene
ENST00000468140 (RN7SL487P-201) 43391384-43391727 misc_RNA
CIL_0005YH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050619-ENSMUSG00000027263 CGP 10090 2:121158273-121198770
GeneTranscriptPositionBiotype
ENSMUSG00000043909 (Trp53bp1)
transformation related protein 53 binding protein 1
ENSMUST00000110647 (Trp53bp1-002) 121194838-121271341 protein_coding
ENSMUST00000110648 (Trp53bp1-001) 121194838-121271407 protein_coding
ENSMUST00000124031 (Trp53bp1-011) 121232100-121235821 processed_transcript
ENSMUST00000124060 (Trp53bp1-008) 121269630-121271370 retained_intron
ENSMUST00000124411 (Trp53bp1-014) 121208845-121221232 retained_intron
ENSMUST00000124554 (Trp53bp1-019) 121208420-121221241 nonsense_mediated_decay
ENSMUST00000129752 (Trp53bp1-010) 121236824-121252027 nonsense_mediated_decay
ENSMUST00000131245 (Trp53bp1-003) 121216143-121271321 protein_coding
ENSMUST00000131426 (Trp53bp1-009) 121258886-121270286 retained_intron
ENSMUST00000132812 (Trp53bp1-015) 121205081-121208574 processed_transcript
ENSMUST00000135890 (Trp53bp1-006) 121193281-121211975 processed_transcript
ENSMUST00000136617 (Trp53bp1-004) 121256514-121271369 processed_transcript
ENSMUST00000140285 (Trp53bp1-005) 121267312-121271361 retained_intron
ENSMUST00000140582 (Trp53bp1-013) 121211308-121218436 processed_transcript
ENSMUST00000142400 (Trp53bp1-017) 121228369-121235689 protein_coding
ENSMUST00000147540 (Trp53bp1-007) 121198251-121236006 nonsense_mediated_decay
ENSMUST00000147554 (Trp53bp1-016) 121199639-121204981 processed_transcript
ENSMUST00000154426 (Trp53bp1-018) 121202693-121207762 nonsense_mediated_decay
ENSMUST00000156493 (Trp53bp1-012) 121215889-121221379 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YH_0001ENSG00000137822ENST00000260383ENST00000561691ENST00000562053ENST00000563147ENST00000563412ENST00000563517ENST00000563963ENST00000564079ENST00000564511ENST00000565548ENST00000566251ENST00000570081ENSG00000243871ENST00000468140CIL_0005YH_0002ENSMUSG00000043909ENSMUST00000110647ENSMUST00000110648ENSMUST00000124031ENSMUST00000124060ENSMUST00000124411ENSMUST00000124554ENSMUST00000129752ENSMUST00000131245ENSMUST00000131426ENSMUST00000132812ENSMUST00000135890ENSMUST00000136617ENSMUST00000140285ENSMUST00000140582ENSMUST00000142400ENSMUST00000147540ENSMUST00000147554ENSMUST00000154426ENSMUST00000156493
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YH_0001ENSG00000137822ENST00000260383ENST00000564079ENSG00000243871ENST00000468140CIL_0005YH_0002ENSMUSG00000043909ENSMUST00000110647ENSMUST00000110648ENSMUST00000131245ENSMUST00000135890ENSMUST00000140582ENSMUST00000147540
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137822 ENST00000260383 N/A N/A N/A N/A N/A N/A N/A 1.880±0.00 N/A N/A N/A N/A N/A N/A
ENST00000561691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564079 N/A 1.468±0.00 N/A N/A N/A N/A N/A N/A N/A 1.108±0.00 N/A N/A N/A N/A
ENST00000564511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243871 ENST00000468140 0.050±0.00 0.208±0.00 N/A 0.228±0.00 0.271±0.00 0.295±0.00 N/A N/A N/A N/A N/A N/A N/A 0.442±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043909 ENSMUST00000110647 N/A N/A N/A 7.078±0.00 1.692±0.00 N/A N/A N/A 2.485±0.00 N/A N/A 6.776±2.07 2.737±0.74 N/A
ENSMUST00000110648 5.348±2.41 3.806±0.43 7.189±1.01 22.948±2.97 3.562±1.09 3.520±0.94 1.773±0.22 2.100±0.31 3.494±2.71 3.999±1.08 1.914±0.42 6.083±1.48 4.373±0.98 4.912±0.59
ENSMUST00000124031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131245 N/A N/A N/A 30.297±0.00 N/A N/A N/A N/A N/A N/A N/A 11.957±0.00 11.032±0.00 29.045±0.00
ENSMUST00000131426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.537±2.27
ENSMUST00000136617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.038±7.95 N/A N/A
ENSMUST00000142400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147540 6.970±2.55 5.875±0.53 7.600±2.28 24.184±1.36 N/A 3.739±0.00 2.530±0.17 3.477±0.00 11.183±4.20 3.230±0.00 1.401±0.00 8.237±2.03 7.389±2.81 8.425±1.95
ENSMUST00000147554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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