C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562133 NDUFAB1-004 ENSG00000004779 9606 - 16:23581014-23596277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLungOvaryTestisENST00000562133
Transcript ID Adrenal Brain Colon Kidney Lung Ovary Testis
ENST00000562133 8.485±0.00 11.451±0.00 15.113±0.00 28.973±0.00 5.349±0.00 18.188±0.00 16.872±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D2 CIL_0006D2_0001 CGP 16:23557362-23596356
CIL_0003VC CIL_0003VC_0002 CGP 16:23581002-23641310

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130904 Ndufab1-005 retained_intron Mus_musculus 0 316
ENSMUST00000123296 Ndufab1-002 protein_coding Mus_musculus 0 313
ENSMUST00000106471 Ndufab1-006 protein_coding Mus_musculus 0 309
ENSMUST00000033157 Ndufab1-001 protein_coding Mus_musculus 0 309
ENSMUST00000139456 Ndufab1-007 protein_coding Mus_musculus 0 307
ENSMUST00000118750 Gm4459-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000166096 Gm17257-201 processed_pseudogene Mus_musculus 0 287
ENSMUST00000130857 Ndufab1-008 retained_intron Mus_musculus 1.99965e-42 176
ENSMUST00000146964 Ndufab1-010 retained_intron Mus_musculus 8.00001e-41 171
ENSMUST00000118534 Gm16032-001 processed_pseudogene Mus_musculus 3e-35 152
ENSMUST00000153173 Ndufab1-004 retained_intron Mus_musculus 7e-32 141

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