C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinoblastoma binding protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562430 RBBP6-004 ENSG00000122257 9606 + 16:24554477-24572860 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverENST00000562430
Transcript ID Breast Heart Kidney Liver
ENST00000562430 0.968±0.00 0.108±0.00 0.288±0.00 0.476±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VB CIL_0003VB_0002 CGP 16:24255553-24572863
CIL_0003V8 CIL_0003V8_0002 CGP 16:24537693-24827632

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071590 Rbbp6-002 protein_coding Mus_musculus 0 5609
ENSMUST00000052135 Rbbp6-001 protein_coding Mus_musculus 0 3417
ENSMUST00000116315 Gm14385-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000126053 Rbbp6-009 retained_intron Mus_musculus 0 575
ENSMUST00000156738 Rbbp6-008 retained_intron Mus_musculus 0 357

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