C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroplastin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564551 NPTN-009 ENSG00000156642 9606 - 15:73570274-73633227 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000564551
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000564551 30.654±0.00 10.550±0.00 8.444±0.00 6.509±0.00 6.638±0.00 20.516±0.00 9.894±0.00 3.104±0.00 50.963±42.38 101.751±0.00 94.214±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HP CIL_0000HP_0002 CGP 15:73319859-73560014
CIL_0005CB CIL_0005CB_0002 CGP 15:73443158-73634134

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114121 Nptn-201 protein_coding Mus_musculus 0 612
ENSMUST00000176896 Nptn-010 nonsense_mediated_decay Mus_musculus 0 612
ENSMUST00000176557 Nptn-012 protein_coding Mus_musculus 0 612
ENSMUST00000085651 Nptn-001 protein_coding Mus_musculus 0 612
ENSMUST00000177292 Nptn-003 protein_coding Mus_musculus 0 612
ENSMUST00000175945 Nptn-009 nonsense_mediated_decay Mus_musculus 0 464
ENSMUST00000177380 Nptn-002 non_stop_decay Mus_musculus 0 320
ENSMUST00000177064 Nptn-007 protein_coding Mus_musculus 0 313
ENSMUST00000176250 Nptn-005 protein_coding Mus_musculus 0 311
ENSMUST00000176916 Nptn-006 nonsense_mediated_decay Mus_musculus 0 311
ENSMUST00000176126 Nptn-008 processed_transcript Mus_musculus 0 303

Loading