C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroplastin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565325 NPTN-003 ENSG00000156642 9606 - 15:73560817-73633245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaENST00000565325
Transcript ID Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta
ENST00000565325 14.418±0.00 5.342±0.00 6.935±0.00 9.422±0.00 4.647±0.00 13.558±0.00 7.801±0.00 18.991±5.67 24.116±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HP CIL_0000HP_0002 CGP 15:73319859-73560014
CIL_0005CB CIL_0005CB_0002 CGP 15:73443158-73634134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085651 Nptn-001 protein_coding Mus_musculus 0 1024
ENSMUST00000176557 Nptn-012 protein_coding Mus_musculus 0 952
ENSMUST00000176916 Nptn-006 nonsense_mediated_decay Mus_musculus 0 887
ENSMUST00000177064 Nptn-007 protein_coding Mus_musculus 0 787
ENSMUST00000176250 Nptn-005 protein_coding Mus_musculus 0 676
ENSMUST00000177292 Nptn-003 protein_coding Mus_musculus 0 662
ENSMUST00000114121 Nptn-201 protein_coding Mus_musculus 0 579
ENSMUST00000175945 Nptn-009 nonsense_mediated_decay Mus_musculus 0 516
ENSMUST00000177021 Nptn-004 retained_intron Mus_musculus 0 466
ENSMUST00000176896 Nptn-010 nonsense_mediated_decay Mus_musculus 0 326

Loading