C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 5, type 2 (vascular endothelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565334 CDH5-008 ENSG00000179776 9606 + 16:66366690-66403408 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverMuscleOvaryENST00000565334
Transcript ID Bladder Brain Colon Heart Liver Muscle Ovary
ENST00000565334 1.438±0.00 0.864±0.00 1.161±0.00 1.436±0.00 1.371±0.00 2.457±0.00 2.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SB CIL_0006SB_0002 CGP 16:64943753-66404786
CIL_0003BQ CIL_0003BQ_0002 CGP 16:66366622-66493529

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034339 Cdh5-201 protein_coding Mus_musculus 0 1243

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