C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: core-binding factor, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565389 CBFB-002 ENSG00000067955 9606 + 16:67029461-67099443 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0005T3 CIL_0005T3_0001 CGP 16:66988589-67101058
CIL_0005T2 CIL_0005T2_0001 CGP 16:67029116-67148539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IEA transcription coactivator activity
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109395 Cbfb-002 protein_coding Mus_musculus 7.00649e-44 182
ENSMUST00000109392 Cbfb-003 protein_coding Mus_musculus 7.00649e-44 182
ENSMUST00000052209 Cbfb-001 protein_coding Mus_musculus 7.00649e-44 182
ENSMUST00000109394 Cbfb-004 protein_coding Mus_musculus 2.00386e-43 180
ENSMUST00000186070 Cbfb-006 retained_intron Mus_musculus 2e-33 147

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