C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005T3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172824-ENSG00000067955 CGP 9606 16:66988589-67101058
GeneTranscriptPositionBiotype
ENSG00000067955 (CBFB)
core-binding factor, beta subunit 		ENST00000290858 (CBFB-001) 67029147-67101058 protein_coding
ENST00000412916 (CBFB-003) 67029245-67101022 protein_coding
ENST00000561924 (CBFB-007) 67029116-67098811 protein_coding
ENST00000563939 (CBFB-009) 67029952-67082297 protein_coding
ENST00000564034 (CBFB-006) 67029179-67066796 protein_coding
ENST00000565389 (CBFB-002) 67029461-67099443 protein_coding
ENST00000566281 (CBFB-011) 67082085-67098969 retained_intron
ENST00000567947 (CBFB-010) 67036427-67066962 retained_intron
ENST00000568858 (CBFB-005) 67093398-67099391 processed_transcript
ENSG00000172824 (CES4A)
carboxylesterase 4A 		ENST00000397205 (CES4A-010) 67005559-67009739 processed_transcript
ENST00000535543 (CES4A-004) 67000552-67009752 nonsense_mediated_decay
ENST00000535696 (CES4A-006) 67000574-67009314 protein_coding
ENST00000535948 (CES4A-009) 67004959-67009758 retained_intron
ENST00000538199 (CES4A-003) 66995681-67009735 protein_coding
ENST00000540579 (CES4A-005) 67000553-67009456 protein_coding
ENST00000540947 (CES4A-001) 66988589-67009758 protein_coding
ENST00000543561 (CES4A-008) 67000601-67009735 retained_intron
ENST00000544478 (CES4A-012) 67006523-67009418 retained_intron
ENST00000544986 (CES4A-011) 67004822-67006695 retained_intron
ENST00000567587 (CES4A-007) 66995628-67009735 nonsense_mediated_decay
ENSG00000265918 (RN7SL543P)
RNA, 7SL, cytoplasmic 543, pseudogene 		ENST00000580506 (RN7SL543P-201) 67019519-67019817 misc_RNA
ENSG00000280334 (RP11-361L15.5)
 ENST00000624046 (RP11-361L15.5-001) 67006672-67009481 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0005T3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060560-ENSMUSG00000031885 CGP 10090 8:105131800-105217989
GeneTranscriptPositionBiotype
ENSMUSG00000031885 (Cbfb)
core binding factor beta 		ENSMUST00000052209 (Cbfb-001) 105170674-105217989 protein_coding
ENSMUST00000109392 (Cbfb-003) 105170744-105217981 protein_coding
ENSMUST00000109394 (Cbfb-004) 105170945-105217981 protein_coding
ENSMUST00000109395 (Cbfb-002) 105170744-105217981 protein_coding
ENSMUST00000186070 (Cbfb-006) 105171109-105178703 retained_intron
ENSMUST00000187323 (Cbfb-008) 105171564-105194535 processed_transcript
ENSMUST00000190915 (Cbfb-007) 105171492-105194555 processed_transcript
ENSMUSG00000060560 (Ces4a)
carboxylesterase 4A 		ENSMUST00000161289 (Ces4a-001) 105131800-105150109 protein_coding
ENSMUSG00000099465 (RP23-144H18.2)
predicted gene 3830 		ENSMUST00000185540 (RP23-144H18.2-001) 105164587-105170367 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005T3_0001ENSG00000067955ENST00000290858ENST00000412916ENST00000561924ENST00000563939ENST00000564034ENST00000565389ENST00000566281ENST00000567947ENST00000568858ENSG00000172824ENST00000397205ENST00000535543ENST00000535696ENST00000535948ENST00000538199ENST00000540579ENST00000540947ENST00000543561ENST00000544478ENST00000544986ENST00000567587ENSG00000265918ENST00000580506ENSG00000280334ENST00000624046CIL_0005T3_0002ENSMUSG00000031885ENSMUST00000052209ENSMUST00000109392ENSMUST00000109394ENSMUST00000109395ENSMUST00000186070ENSMUST00000187323ENSMUST00000190915ENSMUSG00000060560ENSMUST00000161289ENSMUSG00000099465ENSMUST00000185540
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005T3_0001ENSG00000067955ENST00000290858ENST00000412916ENST00000561924ENST00000563939ENST00000566281ENSG00000172824ENST00000397205ENST00000535543ENST00000535696ENST00000538199ENST00000540579ENST00000540947ENST00000543561ENST00000544986ENST00000567587ENSG00000265918ENST00000580506ENSG00000280334ENST00000624046CIL_0005T3_0002ENSMUSG00000031885ENSMUST00000052209ENSMUST00000109392ENSMUST00000109394ENSMUST00000109395ENSMUST00000190915ENSMUSG00000060560ENSMUST00000161289ENSMUSG00000099465ENSMUST00000185540
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067955 ENST00000290858 N/A N/A N/A 1.471±0.00 2.948±0.04 N/A 1.343±0.76 2.187±0.00 0.977±0.19 4.849±2.84 3.968±0.00 4.417±2.23 1.563±0.00 N/A
ENST00000412916 12.429±0.00 4.185±0.00 1.494±0.00 4.557±3.94 N/A 8.241±0.00 2.788±2.15 3.388±2.87 1.224±0.29 2.650±0.05 17.337±0.00 3.665±0.74 2.555±1.36 2.439±0.33
ENST00000561924 N/A N/A 6.892±0.00 6.960±0.00 12.158±0.00 5.304±0.00 4.554±0.00 2.179±0.00 4.639±0.00 3.511±0.00 N/A 10.440±0.53 11.317±0.00 4.814±0.00
ENST00000563939 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.590±0.00 6.750±0.00 8.382±0.00 N/A 6.216±0.00
ENST00000564034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.624±0.00
ENST00000567947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172824 ENST00000397205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.654±0.00 N/A N/A N/A
ENST00000535543 N/A N/A N/A N/A N/A N/A N/A N/A 0.584±0.00 N/A N/A N/A 0.229±0.00 N/A
ENST00000535696 N/A N/A N/A N/A 0.146±0.00 N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000535948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538199 N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A
ENST00000540579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.021±0.00 0.261±0.00 N/A
ENST00000540947 N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A N/A 1.132±0.00 N/A 0.228±0.00 N/A
ENST00000543561 N/A N/A 0.075±0.00 N/A 0.170±0.15 N/A N/A 2.824±0.00 0.333±0.00 N/A N/A 0.834±0.51 0.108±0.04 N/A
ENST00000544478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544986 N/A N/A 0.147±0.00 N/A N/A N/A 0.398±0.00 N/A N/A 2.310±0.00 N/A 0.442±0.00 N/A N/A
ENST00000567587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.08 N/A
ENSG00000265918 ENST00000580506 0.060±0.00 N/A N/A 0.138±0.00 0.131±0.00 N/A N/A 0.130±0.00 0.058±0.00 0.311±0.00 0.745±0.00 0.266±0.00 N/A 0.349±0.00
ENSG00000280334 ENST00000624046 0.370±0.00 0.778±0.00 0.024±0.00 0.238±0.00 0.040±0.00 0.225±0.00 0.730±0.00 2.127±1.96 0.383±0.00 0.118±0.00 0.994±0.00 0.266±0.21 0.216±0.07 0.723±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031885 ENSMUST00000052209 1.292±0.10 1.387±0.00 4.745±0.08 3.215±0.10 2.426±0.00 0.917±0.00 1.235±0.42 0.980±0.39 1.545±0.93 2.328±0.47 12.318±1.37 2.506±1.83 4.049±1.68 1.471±0.44
ENSMUST00000109392 5.079±1.28 5.451±2.64 8.834±0.43 6.432±3.37 3.826±1.76 4.677±1.97 2.948±0.87 2.906±0.67 3.192±1.38 7.781±0.67 14.775±2.46 7.758±3.76 7.912±3.85 2.184±0.36
ENSMUST00000109394 N/A N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A N/A N/A 8.715±0.22 1.056±0.00 N/A
ENSMUST00000109395 2.298±0.00 8.119±3.86 N/A N/A 7.524±2.35 4.054±0.60 0.713±0.00 1.250±0.03 N/A N/A N/A 4.560±2.09 N/A N/A
ENSMUST00000186070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190915 N/A N/A N/A 23.241±0.00 N/A N/A N/A N/A N/A N/A N/A 123.360±0.00 176.831±0.00 50.408±0.00
ENSMUSG00000060560 ENSMUST00000161289 0.113±0.06 0.092±0.04 0.003±0.00 0.013±0.00 0.198±0.02 N/A 0.011±0.00 0.027±0.01 0.194±0.22 0.034±0.00 0.029±0.01 0.023±0.01 0.004±0.00 0.102±0.03
ENSMUSG00000099465 ENSMUST00000185540 0.133±0.03 0.563±0.17 0.137±0.02 0.036±0.01 0.089±0.03 0.084±0.02 N/A 0.026±0.01 0.032±0.02 0.136±0.00 0.121±0.04 0.225±0.13 0.030±0.01 N/A

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