C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: core binding factor beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109394 Cbfb-004 ENSMUSG00000031885 10090 + 8:105170945-105217981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000109394
Transcript ID Brain Ovary Placenta
ENSMUST00000109394 0.492±0.00 8.715±0.22 1.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005T3 CIL_0005T3_0002 CGP 8:105131800-105217989
CIL_0005T2 CIL_0005T2_0002 CGP 8:105170674-105253053

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IMP ossification
GO:0001649 IMP osteoblast differentiation
GO:0003713 IEA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0030098 IMP lymphocyte differentiation
GO:0030099 IMP myeloid cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048469 IMP cell maturation
GO:0060216 IMP definitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000059961 cbfb-001 protein_coding Danio_rerio 4.2039e-45 187
ENST00000290858 CBFB-001 protein_coding Homo_sapiens 0 833
ENST00000412916 CBFB-003 protein_coding Homo_sapiens 0 833
ENST00000561924 CBFB-007 protein_coding Homo_sapiens 0 313
ENST00000563939 CBFB-009 protein_coding Homo_sapiens 0 291
ENST00000564034 CBFB-006 protein_coding Homo_sapiens 0 470
ENST00000565389 CBFB-002 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000566281 CBFB-011 retained_intron Homo_sapiens 0 329
ENST00000567947 CBFB-010 retained_intron Homo_sapiens 3.00004e-41 172

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