Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	core binding factor beta
ENSMUST00000109392	Cbfb-003	ENSMUSG00000031885	10090	+	8:105170744-105217981	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000109392	5.079±1.28	5.451±2.64	8.834±0.43	6.432±3.37	3.826±1.76	4.677±1.97	2.948±0.87	2.906±0.67	3.192±1.38	7.781±0.67	14.775±2.46	7.758±3.76	7.912±3.85	2.184±0.36

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0005T3	CIL_0005T3_0002	CGP	8:105131800-105217989
CIL_0005T2	CIL_0005T2_0002	CGP	8:105170674-105253053

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0001503	IMP	ossification
GO:0001649	IMP	osteoblast differentiation
GO:0003713	IEA	transcription coactivator activity
GO:0005515	IPI	protein binding
GO:0005634	IDA	nucleus
GO:0030098	IMP	lymphocyte differentiation
GO:0030099	IMP	myeloid cell differentiation
GO:0045944	IDA	positive regulation of transcription from RNA polymerase II promoter
GO:0048469	IMP	cell maturation
GO:0060216	IMP	definitive hemopoiesis

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSDART00000059961	cbfb-001	protein_coding	Danio_rerio	0	339
ENST00000290858	CBFB-001	protein_coding	Homo_sapiens	0	1437
ENST00000412916	CBFB-003	protein_coding	Homo_sapiens	0	955
ENST00000561924	CBFB-007	protein_coding	Homo_sapiens	0	804
ENST00000563939	CBFB-009	protein_coding	Homo_sapiens	0	484
ENST00000564034	CBFB-006	protein_coding	Homo_sapiens	0	486
ENST00000565389	CBFB-002	protein_coding	Homo_sapiens	7.00649e-44	182
ENST00000566281	CBFB-011	retained_intron	Homo_sapiens	1e-33	147
ENST00000567947	CBFB-010	retained_intron	Homo_sapiens	0	366

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