C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007YA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs848 VISTA 9606 16:51157888-51759114
GeneTranscriptPositionBiotype
ENSG00000224578 (HNRNPA1P48)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 48 		ENST00000562726 (HNRNPA1P48-002) 51645756-51647132 processed_transcript
ENST00000565308 (HNRNPA1P48-001) 51645820-51646780 transcribed_processed_pseudogene
ENSG00000260818 (UNGP1)
uracil-DNA glycosylase pseudogene 1 		ENST00000565839 (UNGP1-001) 51277852-51279112 processed_pseudogene
ENSG00000260850 (RP11-437L7.1)
 ENST00000569751 (RP11-437L7.1-001) 51354456-51356532 lincRNA
ENSG00000280344 (AC009166.7)
 ENST00000624410 (AC009166.7-001) 51176066-51178898 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0007YA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs848 VISTA 10090 8:89023884-89625178
GeneTranscriptPositionBiotype
ENSMUSG00000031665 (Sall1)
sal-like 1 (Drosophila) 		ENSMUST00000034090 (Sall1-201) 89027248-89044162 protein_coding
ENSMUSG00000064758 (Gm26331)
predicted gene, 26331 		ENSMUST00000082824 (Gm26331-201) 89589435-89589541 snRNA
ENSMUSG00000069962 (Gm5356)
predicted pseudogene 5356 		ENSMUST00000093326 (Gm5356-001) 89186946-89187560 processed_pseudogene
ENSMUSG00000094790 (Gm6625)
predicted gene 6625 		ENSMUST00000177870 (Gm6625-201) 89146747-89147247 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007YA_0001ENSG00000224578ENST00000562726ENST00000565308ENSG00000260818ENST00000565839ENSG00000260850ENST00000569751ENSG00000280344ENST00000624410CIL_0007YA_0002ENSMUSG00000031665ENSMUST00000034090ENSMUSG00000064758ENSMUST00000082824ENSMUSG00000069962ENSMUST00000093326ENSMUSG00000094790ENSMUST00000177870
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007YA_0001ENSG00000224578ENST00000562726ENST00000565308ENSG00000260818ENST00000565839ENSG00000260850ENST00000569751ENSG00000280344ENST00000624410CIL_0007YA_0002ENSMUSG00000031665ENSMUST00000034090ENSMUSG00000064758ENSMUST00000082824ENSMUSG00000069962ENSMUST00000093326ENSMUSG00000094790ENSMUST00000177870
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000224578 ENST00000562726 3.390±0.00 4.623±0.00 N/A 0.528±0.47 1.029±0.88 1.913±1.79 1.411±0.00 1.226±1.13 0.530±0.51 2.823±0.00 2.455±0.00 3.657±2.10 2.863±1.56 2.649±0.76
ENST00000565308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.208±0.00 N/A N/A
ENSG00000260818 ENST00000565839 0.034±0.00 0.153±0.00 N/A 0.154±0.00 0.214±0.00 0.076±0.00 0.065±0.00 0.128±0.00 0.102±0.00 0.186±0.05 0.030±0.00 0.029±0.01 N/A 0.098±0.00
ENSG00000260850 ENST00000569751 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000280344 ENST00000624410 0.036±0.00 0.068±0.00 N/A 0.204±0.06 0.080±0.03 0.060±0.04 0.026±0.00 0.289±0.06 0.031±0.01 N/A 0.004±0.00 0.073±0.00 0.016±0.00 0.059±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031665 ENSMUST00000034090 3.827±3.96 0.011±0.00 0.013±0.00 4.270±2.87 0.034±0.02 2.007±0.46 0.332±0.02 5.109±3.53 4.386±3.89 0.174±0.06 0.021±0.01 4.387±1.88 3.608±0.90 0.179±0.09
ENSMUSG00000064758 ENSMUST00000082824 N/A N/A N/A 65.219±62.78 N/A N/A N/A N/A 70.634±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000069962 ENSMUST00000093326 0.095±0.03 N/A 0.016±0.00 0.018±0.01 0.181±0.00 N/A N/A 0.054±0.00 0.039±0.03 N/A 0.111±0.02 N/A 0.010±0.00 N/A
ENSMUSG00000094790 ENSMUST00000177870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.10 0.117±0.02

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