C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008AT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs78 VISTA 9606 16:50772237-51373198
GeneTranscriptPositionBiotype
ENSG00000103449 (SALL1)
spalt-like transcription factor 1 		ENST00000251020 (SALL1-001) 51135975-51151275 protein_coding
ENST00000440970 (SALL1-201) 51135975-51150597 protein_coding
ENST00000562674 (SALL1-005) 51143204-51151367 processed_transcript
ENST00000566102 (SALL1-002) 51137064-51151241 protein_coding
ENST00000570206 (SALL1-003) 51137332-51150597 protein_coding
ENSG00000199771 (RNA5SP426)
RNA, 5S ribosomal pseudogene 426 		ENST00000362901 (RNA5SP426-201) 50869455-50869575 rRNA
ENSG00000260042 (CTD-2034I21.1)
 ENST00000569986 (CTD-2034I21.1-001) 50856614-50879278 lincRNA
ENSG00000260620 (RP11-883G14.4)
 ENST00000569009 (RP11-883G14.4-001) 51054728-51056399 lincRNA
ENSG00000260818 (UNGP1)
uracil-DNA glycosylase pseudogene 1 		ENST00000565839 (UNGP1-001) 51277852-51279112 processed_pseudogene
ENSG00000260850 (RP11-437L7.1)
 ENST00000569751 (RP11-437L7.1-001) 51354456-51356532 lincRNA
ENSG00000261238 (AC009166.5)
 ENST00000570060 (AC009166.5-001) 51149239-51149819 antisense
ENSG00000261241 (RP11-883G14.1)
 ENST00000567534 (RP11-883G14.1-002) 50884209-50901061 lincRNA
ENST00000570245 (RP11-883G14.1-001) 50884209-50900690 lincRNA
ENSG00000261282 (SOD1P2)
superoxide dismutase 1, soluble pseudogene 2 		ENST00000563903 (SOD1P2-001) 51107571-51108021 processed_pseudogene
ENSG00000261637 (RP11-883G14.2)
 ENST00000563826 (RP11-883G14.2-001) 51017758-51035777 lincRNA
ENST00000568607 (RP11-883G14.2-002) 51024897-51035771 lincRNA
ENSG00000261703 (RP11-327F22.5)
 ENST00000565327 (RP11-327F22.5-001) 50806668-50807629 lincRNA
ENSG00000263082 (CTD-2034I21.2)
 ENST00000576842 (CTD-2034I21.2-001) 50880209-50884101 lincRNA
ENSG00000280344 (AC009166.7)
 ENST00000624410 (AC009166.7-001) 51176066-51178898 TEC
CIL_0008AT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs78 VISTA 10090 8:88673175-89274114
GeneTranscriptPositionBiotype
ENSMUSG00000031665 (Sall1)
sal-like 1 (Drosophila) 		ENSMUST00000034090 (Sall1-201) 89027248-89044162 protein_coding
ENSMUSG00000036712 (Cyld)
cylindromatosis (turban tumor syndrome) 		ENSMUST00000043526 (Cyld-201) 88697028-88751945 protein_coding
ENSMUST00000098519 (Cyld-202) 88705222-88751945 protein_coding
ENSMUST00000109626 (Cyld-203) 88705222-88751945 protein_coding
ENSMUSG00000055994 (Nod2)
nucleotide-binding oligomerization domain containing 2 		ENSMUST00000054324 (Nod2-003) 88647315-88688474 protein_coding
ENSMUST00000109634 (Nod2-002) 88651341-88688474 protein_coding
ENSMUST00000118370 (Nod2-001) 88647315-88688474 protein_coding
ENSMUST00000124091 (Nod2-004) 88647384-88665700 retained_intron
ENSMUSG00000056772 (Rps6-ps2)
ribosomal protein S6, pseudogene 2 		ENSMUST00000079841 (Rps6-ps2-201) 88806391-88807140 processed_pseudogene
ENSMUSG00000069962 (Gm5356)
predicted pseudogene 5356 		ENSMUST00000093326 (Gm5356-001) 89186946-89187560 processed_pseudogene
ENSMUSG00000094790 (Gm6625)
predicted gene 6625 		ENSMUST00000177870 (Gm6625-201) 89146747-89147247 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AT_0001ENSG00000103449ENST00000251020ENST00000440970ENST00000562674ENST00000566102ENST00000570206ENSG00000199771ENST00000362901ENSG00000260042ENST00000569986ENSG00000260620ENST00000569009ENSG00000260818ENST00000565839ENSG00000260850ENST00000569751ENSG00000261238ENST00000570060ENSG00000261241ENST00000567534ENST00000570245ENSG00000261282ENST00000563903ENSG00000261637ENST00000563826ENST00000568607ENSG00000261703ENST00000565327ENSG00000263082ENST00000576842ENSG00000280344ENST00000624410CIL_0008AT_0002ENSMUSG00000031665ENSMUST00000034090ENSMUSG00000036712ENSMUST00000043526ENSMUST00000098519ENSMUST00000109626ENSMUSG00000055994ENSMUST00000054324ENSMUST00000109634ENSMUST00000118370ENSMUST00000124091ENSMUSG00000056772ENSMUST00000079841ENSMUSG00000069962ENSMUST00000093326ENSMUSG00000094790ENSMUST00000177870
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AT_0001ENSG00000103449ENST00000251020ENST00000440970ENST00000566102ENST00000570206ENSG00000199771ENST00000362901ENSG00000260042ENST00000569986ENSG00000260620ENST00000569009ENSG00000260818ENST00000565839ENSG00000260850ENST00000569751ENSG00000261238ENST00000570060ENSG00000261241ENST00000567534ENST00000570245ENSG00000261282ENST00000563903ENSG00000261637ENST00000563826ENST00000568607ENSG00000261703ENST00000565327ENSG00000263082ENST00000576842ENSG00000280344ENST00000624410CIL_0008AT_0002ENSMUSG00000031665ENSMUST00000034090ENSMUSG00000036712ENSMUST00000043526ENSMUST00000098519ENSMUST00000109626ENSMUSG00000055994ENSMUST00000054324ENSMUST00000109634ENSMUST00000118370ENSMUST00000124091ENSMUSG00000056772ENSMUST00000079841ENSMUSG00000069962ENSMUST00000093326ENSMUSG00000094790ENSMUST00000177870
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103449 ENST00000251020 N/A N/A N/A 3.887±2.32 0.059±0.00 0.122±0.00 N/A 12.389±9.88 7.509±0.00 N/A N/A 0.912±0.77 0.786±0.08 1.250±0.57
ENST00000440970 0.069±0.00 N/A N/A N/A N/A 0.126±0.00 N/A N/A 1.852±0.00 N/A N/A N/A 0.663±0.00 N/A
ENST00000562674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.443±0.00 1.651±0.23 2.902±0.00
ENST00000570206 0.016±0.00 0.025±0.00 2.170±0.00 1.071±0.69 0.111±0.00 0.426±0.00 0.096±0.00 2.212±0.00 0.386±0.00 N/A N/A 0.869±0.00 0.503±0.24 0.371±0.00
ENSG00000199771 ENST00000362901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.708±0.00
ENSG00000260042 ENST00000569986 N/A N/A N/A 0.041±0.00 N/A N/A N/A 0.057±0.00 0.049±0.00 N/A N/A N/A N/A 0.100±0.00
ENSG00000260620 ENST00000569009 0.217±0.00 0.828±0.00 N/A 0.388±0.00 0.264±0.00 N/A 0.296±0.00 N/A 0.055±0.00 0.226±0.00 0.355±0.00 N/A N/A 0.307±0.01
ENSG00000260818 ENST00000565839 0.034±0.00 0.153±0.00 N/A 0.154±0.00 0.214±0.00 0.076±0.00 0.065±0.00 0.128±0.00 0.102±0.00 0.186±0.05 0.030±0.00 0.029±0.01 N/A 0.098±0.00
ENSG00000260850 ENST00000569751 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000261238 ENST00000570060 N/A N/A 0.182±0.00 0.419±0.00 N/A N/A N/A 0.890±0.19 N/A N/A N/A 0.072±0.02 0.155±0.00 N/A
ENSG00000261241 ENST00000567534 N/A N/A N/A N/A N/A 0.345±0.00 N/A 0.048±0.00 0.155±0.00 N/A N/A 0.072±0.00 0.042±0.00 0.091±0.03
ENST00000570245 N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A 0.109±0.00 0.105±0.00 0.176±0.00 0.051±0.00 0.079±0.00 0.152±0.00
ENSG00000261282 ENST00000563903 N/A N/A N/A N/A N/A N/A N/A 1.315±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000261637 ENST00000563826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.277±0.00
ENST00000568607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.240±0.10
ENSG00000261703 ENST00000565327 N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A 0.246±0.00 N/A N/A 0.616±0.05
ENSG00000263082 ENST00000576842 N/A N/A 0.133±0.00 0.029±0.01 N/A N/A N/A 0.060±0.00 0.829±0.00 0.046±0.00 N/A 0.045±0.03 0.019±0.00 0.039±0.00
ENSG00000280344 ENST00000624410 0.036±0.00 0.068±0.00 N/A 0.204±0.06 0.080±0.03 0.060±0.04 0.026±0.00 0.289±0.06 0.031±0.01 N/A 0.004±0.00 0.073±0.00 0.016±0.00 0.059±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031665 ENSMUST00000034090 3.827±3.96 0.011±0.00 0.013±0.00 4.270±2.87 0.034±0.02 2.007±0.46 0.332±0.02 5.109±3.53 4.386±3.89 0.174±0.06 0.021±0.01 4.387±1.88 3.608±0.90 0.179±0.09
ENSMUSG00000036712 ENSMUST00000043526 1.923±0.32 1.314±0.00 0.520±0.00 N/A N/A 0.471±0.10 0.586±0.00 1.062±0.00 0.491±0.03 N/A N/A N/A 1.069±0.00 0.371±0.17
ENSMUST00000098519 N/A 4.784±0.00 N/A 12.567±0.00 N/A N/A N/A N/A 0.252±0.00 N/A 1.266±0.25 1.643±0.81 N/A N/A
ENSMUST00000109626 1.728±0.45 3.245±1.03 3.043±0.00 7.995±0.00 1.058±0.22 2.118±0.93 1.227±0.00 N/A 1.089±0.50 1.244±0.00 1.867±0.35 2.606±1.92 3.674±2.12 3.234±0.00
ENSMUSG00000055994 ENSMUST00000054324 N/A N/A N/A N/A 0.268±0.00 N/A N/A 0.170±0.11 N/A N/A N/A N/A N/A N/A
ENSMUST00000109634 0.431±0.27 0.217±0.09 N/A 0.259±0.00 0.412±0.15 0.201±0.00 0.193±0.03 0.230±0.10 0.041±0.03 0.516±0.00 N/A 0.252±0.08 0.764±0.11 0.064±0.03
ENSMUST00000118370 0.322±0.11 N/A 0.147±0.02 0.056±0.00 0.454±0.20 0.633±0.16 0.343±0.08 0.248±0.12 0.023±0.01 0.660±0.23 0.243±0.07 0.326±0.16 0.282±0.23 0.093±0.00
ENSMUST00000124091 0.316±0.01 0.380±0.16 0.084±0.00 0.053±0.00 0.720±0.20 0.533±0.19 0.159±0.02 0.294±0.09 0.023±0.01 1.134±0.34 N/A 0.441±0.26 0.091±0.00 0.112±0.04
ENSMUSG00000056772 ENSMUST00000079841 0.060±0.00 0.143±0.00 0.116±0.03 0.100±0.12 N/A N/A N/A N/A 0.021±0.01 N/A N/A 0.253±0.06 0.382±0.46 0.078±0.03
ENSMUSG00000069962 ENSMUST00000093326 0.095±0.03 N/A 0.016±0.00 0.018±0.01 0.181±0.00 N/A N/A 0.054±0.00 0.039±0.03 N/A 0.111±0.02 N/A 0.010±0.00 N/A
ENSMUSG00000094790 ENSMUST00000177870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.10 0.117±0.02

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