C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008AN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs75 VISTA 9606 16:51055384-51656808
GeneTranscriptPositionBiotype
ENSG00000103449 (SALL1)
spalt-like transcription factor 1 		ENST00000251020 (SALL1-001) 51135975-51151275 protein_coding
ENST00000440970 (SALL1-201) 51135975-51150597 protein_coding
ENST00000562674 (SALL1-005) 51143204-51151367 processed_transcript
ENST00000566102 (SALL1-002) 51137064-51151241 protein_coding
ENST00000570206 (SALL1-003) 51137332-51150597 protein_coding
ENSG00000224578 (HNRNPA1P48)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 48 		ENST00000562726 (HNRNPA1P48-002) 51645756-51647132 processed_transcript
ENST00000565308 (HNRNPA1P48-001) 51645820-51646780 transcribed_processed_pseudogene
ENSG00000260620 (RP11-883G14.4)
 ENST00000569009 (RP11-883G14.4-001) 51054728-51056399 lincRNA
ENSG00000260818 (UNGP1)
uracil-DNA glycosylase pseudogene 1 		ENST00000565839 (UNGP1-001) 51277852-51279112 processed_pseudogene
ENSG00000260850 (RP11-437L7.1)
 ENST00000569751 (RP11-437L7.1-001) 51354456-51356532 lincRNA
ENSG00000261238 (AC009166.5)
 ENST00000570060 (AC009166.5-001) 51149239-51149819 antisense
ENSG00000261282 (SOD1P2)
superoxide dismutase 1, soluble pseudogene 2 		ENST00000563903 (SOD1P2-001) 51107571-51108021 processed_pseudogene
ENSG00000280344 (AC009166.7)
 ENST00000624410 (AC009166.7-001) 51176066-51178898 TEC
CIL_0008AN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs75 VISTA 10090 8:88940947-89542638
GeneTranscriptPositionBiotype
ENSMUSG00000031665 (Sall1)
sal-like 1 (Drosophila) 		ENSMUST00000034090 (Sall1-201) 89027248-89044162 protein_coding
ENSMUSG00000069962 (Gm5356)
predicted pseudogene 5356 		ENSMUST00000093326 (Gm5356-001) 89186946-89187560 processed_pseudogene
ENSMUSG00000094790 (Gm6625)
predicted gene 6625 		ENSMUST00000177870 (Gm6625-201) 89146747-89147247 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AN_0001ENSG00000103449ENST00000251020ENST00000440970ENST00000562674ENST00000566102ENST00000570206ENSG00000224578ENST00000562726ENST00000565308ENSG00000260620ENST00000569009ENSG00000260818ENST00000565839ENSG00000260850ENST00000569751ENSG00000261238ENST00000570060ENSG00000261282ENST00000563903ENSG00000280344ENST00000624410CIL_0008AN_0002ENSMUSG00000031665ENSMUST00000034090ENSMUSG00000069962ENSMUST00000093326ENSMUSG00000094790ENSMUST00000177870
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AN_0001ENSG00000103449ENST00000251020ENST00000440970ENST00000566102ENST00000570206ENSG00000224578ENST00000562726ENST00000565308ENSG00000260620ENST00000569009ENSG00000260818ENST00000565839ENSG00000260850ENST00000569751ENSG00000261238ENST00000570060ENSG00000261282ENST00000563903ENSG00000280344ENST00000624410CIL_0008AN_0002ENSMUSG00000031665ENSMUST00000034090ENSMUSG00000069962ENSMUST00000093326ENSMUSG00000094790ENSMUST00000177870
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103449 ENST00000251020 N/A N/A N/A 3.887±2.32 0.059±0.00 0.122±0.00 N/A 12.389±9.88 7.509±0.00 N/A N/A 0.912±0.77 0.786±0.08 1.250±0.57
ENST00000440970 0.069±0.00 N/A N/A N/A N/A 0.126±0.00 N/A N/A 1.852±0.00 N/A N/A N/A 0.663±0.00 N/A
ENST00000562674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.443±0.00 1.651±0.23 2.902±0.00
ENST00000570206 0.016±0.00 0.025±0.00 2.170±0.00 1.071±0.69 0.111±0.00 0.426±0.00 0.096±0.00 2.212±0.00 0.386±0.00 N/A N/A 0.869±0.00 0.503±0.24 0.371±0.00
ENSG00000224578 ENST00000562726 3.390±0.00 4.623±0.00 N/A 0.528±0.47 1.029±0.88 1.913±1.79 1.411±0.00 1.226±1.13 0.530±0.51 2.823±0.00 2.455±0.00 3.657±2.10 2.863±1.56 2.649±0.76
ENST00000565308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.208±0.00 N/A N/A
ENSG00000260620 ENST00000569009 0.217±0.00 0.828±0.00 N/A 0.388±0.00 0.264±0.00 N/A 0.296±0.00 N/A 0.055±0.00 0.226±0.00 0.355±0.00 N/A N/A 0.307±0.01
ENSG00000260818 ENST00000565839 0.034±0.00 0.153±0.00 N/A 0.154±0.00 0.214±0.00 0.076±0.00 0.065±0.00 0.128±0.00 0.102±0.00 0.186±0.05 0.030±0.00 0.029±0.01 N/A 0.098±0.00
ENSG00000260850 ENST00000569751 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000261238 ENST00000570060 N/A N/A 0.182±0.00 0.419±0.00 N/A N/A N/A 0.890±0.19 N/A N/A N/A 0.072±0.02 0.155±0.00 N/A
ENSG00000261282 ENST00000563903 N/A N/A N/A N/A N/A N/A N/A 1.315±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000280344 ENST00000624410 0.036±0.00 0.068±0.00 N/A 0.204±0.06 0.080±0.03 0.060±0.04 0.026±0.00 0.289±0.06 0.031±0.01 N/A 0.004±0.00 0.073±0.00 0.016±0.00 0.059±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031665 ENSMUST00000034090 3.827±3.96 0.011±0.00 0.013±0.00 4.270±2.87 0.034±0.02 2.007±0.46 0.332±0.02 5.109±3.53 4.386±3.89 0.174±0.06 0.021±0.01 4.387±1.88 3.608±0.90 0.179±0.09
ENSMUSG00000069962 ENSMUST00000093326 0.095±0.03 N/A 0.016±0.00 0.018±0.01 0.181±0.00 N/A N/A 0.054±0.00 0.039±0.03 N/A 0.111±0.02 N/A 0.010±0.00 N/A
ENSMUSG00000094790 ENSMUST00000177870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.10 0.117±0.02

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