C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SUB1 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566062 SUB1P4-001 ENSG00000260247 9606 + 16:23537061-23537556 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastTestisENST00000566062
Transcript ID Adrenal Breast Testis
ENST00000566062 0.133±0.00 0.031±0.00 0.070±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D4 CIL_0006D4_0001 CGP 16:23463542-23557731
CIL_0006D3 CIL_0006D3_0001 CGP 16:23522014-23574389

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110504 Sub1-002 protein_coding Mus_musculus 0 228
ENSMUST00000022816 Sub1-001 protein_coding Mus_musculus 0 228
ENSMUST00000134414 Sub1-003 processed_transcript Mus_musculus 0 200
ENSMUST00000129533 Sub1-004 retained_intron Mus_musculus 0 200
ENSMUST00000120656 Gm14620-001 processed_pseudogene Mus_musculus 3.99931e-42 174

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