C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUB1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129533 Sub1-004 ENSMUSG00000022205 10090 - 15:11986134-11996012 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129533
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129533 5.677±0.78 30.567±9.19 1.596±0.00 1.407±0.75 2.123±0.69 2.199±0.52 42.009±14.13 2.095±0.00 6.692±0.00 13.126±11.10 40.150±13.91 10.105±5.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265073 SUB1-001 protein_coding Homo_sapiens 0 368
ENST00000502453 SUB1-005 retained_intron Homo_sapiens 2e-30 139
ENST00000502897 SUB1-007 protein_coding Homo_sapiens 0 361
ENST00000504789 SUB1-008 processed_transcript Homo_sapiens 0 259
ENST00000506237 SUB1-011 protein_coding Homo_sapiens 0 361
ENST00000510442 SUB1-009 protein_coding Homo_sapiens 0 228
ENST00000511175 SUB1-014 retained_intron Homo_sapiens 0 259
ENST00000511615 SUB1-004 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000511988 SUB1-010 retained_intron Homo_sapiens 0 228
ENST00000512913 SUB1-012 protein_coding Homo_sapiens 0 361
ENST00000513013 SUB1-013 processed_transcript Homo_sapiens 0 257
ENST00000515355 SUB1-006 protein_coding Homo_sapiens 0 361
ENST00000524415 SUB1P1-001 processed_pseudogene Homo_sapiens 0 322
ENST00000564581 SUB1P3-001 processed_pseudogene Homo_sapiens 0 209
ENST00000566062 SUB1P4-001 processed_pseudogene Homo_sapiens 0 200

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