C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUB1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134414 Sub1-003 ENSMUSG00000022205 10090 - 15:11986454-11995750 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryPlacentaTestisENSMUST00000134414
Transcript ID Brain Colon Liver Ovary Placenta Testis
ENSMUST00000134414 123.645±0.00 0.879±0.00 2.260±0.00 30.277±42.17 159.916±0.00 94.920±91.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265073 SUB1-001 protein_coding Homo_sapiens 0 361
ENST00000502453 SUB1-005 retained_intron Homo_sapiens 2e-30 139
ENST00000502897 SUB1-007 protein_coding Homo_sapiens 0 361
ENST00000504789 SUB1-008 processed_transcript Homo_sapiens 0 259
ENST00000506237 SUB1-011 protein_coding Homo_sapiens 0 361
ENST00000510442 SUB1-009 protein_coding Homo_sapiens 0 228
ENST00000511175 SUB1-014 retained_intron Homo_sapiens 0 259
ENST00000511615 SUB1-004 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000511988 SUB1-010 retained_intron Homo_sapiens 0 228
ENST00000512913 SUB1-012 protein_coding Homo_sapiens 0 361
ENST00000513013 SUB1-013 processed_transcript Homo_sapiens 0 257
ENST00000515355 SUB1-006 protein_coding Homo_sapiens 0 361
ENST00000524415 SUB1P1-001 processed_pseudogene Homo_sapiens 0 322
ENST00000564581 SUB1P3-001 processed_pseudogene Homo_sapiens 0 209
ENST00000566062 SUB1P4-001 processed_pseudogene Homo_sapiens 0 200

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