C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566849 ZSCAN29-002 ENSG00000140265 9606 - 15:43361018-43370062 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000566849
Transcript ID Testis
ENST00000566849 27.157±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YG CIL_0005YG_0001 CGP 15:43330674-43371025
CIL_0005YH CIL_0005YH_0001 CGP 15:43358172-43409771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110661 Zscan29-001 protein_coding Mus_musculus 0 1351
ENSMUST00000163766 Zscan29-201 protein_coding Mus_musculus 0 1338
ENSMUST00000079024 Zscan29-004 protein_coding Mus_musculus 0 893
ENSMUST00000156370 Zscan29-003 retained_intron Mus_musculus 0 614
ENSMUST00000146243 Zscan29-002 protein_coding Mus_musculus 0 545
ENSMUST00000180016 Zfp62-202 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000061757 Zfp62-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000136539 Zfp62-010 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000109197 Zfp62-008 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000109198 Zfp62-001 protein_coding Mus_musculus 0.00000002 66

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