C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi-associated, gamma adaptin ear containing, ARF binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567201 GGA2-017 ENSG00000103365 9606 - 16:23486085-23494402 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyLiverLungMuscleENST00000567201
Transcript ID Bladder Colon Heart Kidney Liver Lung Muscle
ENST00000567201 9.224±0.00 5.800±0.00 2.182±0.00 4.883±0.00 5.250±0.00 10.929±0.00 1.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D5 CIL_0006D5_0001 CGP 16:23388493-23521995
CIL_0006D4 CIL_0006D4_0001 CGP 16:23463542-23557731

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124566 Gga2-003 nonsense_mediated_decay Mus_musculus 0 658
ENSMUST00000033160 Gga2-001 protein_coding Mus_musculus 0 658
ENSMUST00000145277 Gga2-002 retained_intron Mus_musculus 0 392

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