C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567559 RP11-281J9.1-001 ENSG00000261330 9606 + 16:77892422-77892915 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungMuscleTestisENST00000567559
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Muscle Testis
ENST00000567559 0.082±0.00 0.254±0.00 0.885±0.00 0.178±0.00 0.057±0.00 0.232±0.00 0.056±0.00 0.104±0.00 0.320±0.00 1.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OI CIL_0003OI_0001 CGP 16:77722492-77980107
CIL_0004YB CIL_0004YB_0002 CGP 16:77788530-78066761
CIL_0008I7 CIL_0008I7_0001 VISTA 16:77875854-78477465

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 544
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 531
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 529
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 521
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 510
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 486
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 473
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 195

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