C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567671 RAB11A-005 ENSG00000103769 9606 + 15:65870013-65887791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000567671
Transcript ID Adrenal Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000567671 39.296±0.00 26.627±0.00 18.079±0.00 37.912±0.00 12.506±0.00 55.296±0.00 11.496±0.00 93.216±69.52 57.267±39.40 108.183±34.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VF CIL_0004VF_0002 CGP 15:65611366-65792293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172298 Rab11a-001 protein_coding Mus_musculus 0 911
ENSMUST00000169058 Rab11a-002 protein_coding Mus_musculus 0 660
ENSMUST00000004892 Rab11a-005 protein_coding Mus_musculus 0 651
ENSMUST00000171100 Rab11a-006 protein_coding Mus_musculus 0 590
ENSMUST00000165083 Rab11a-003 processed_transcript Mus_musculus 0 525
ENSMUST00000172444 Rab11a-008 retained_intron Mus_musculus 0 272
ENSMUST00000167569 Rab11a-004 protein_coding Mus_musculus 0 267
ENSMUST00000166857 Rab11a-009 processed_transcript Mus_musculus 0 265
ENSMUST00000168366 Rab11a-007 protein_coding Mus_musculus 0 261

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