C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 3B (BRIGHT-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569680 ARID3B-002 ENSG00000179361 9606 + 15:74541264-74575017 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000569680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000569680 0.247±0.00 0.675±0.00 0.300±0.00 0.208±0.00 0.227±0.04 0.281±0.00 0.130±0.00 0.208±0.00 0.226±0.00 0.280±0.00 0.193±0.00 0.272±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0001 VISTA 15:74278506-74880453

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164035 Arid3b-003 nonsense_mediated_decay Mus_musculus 0 817
ENSMUST00000164010 Arid3b-006 protein_coding Mus_musculus 0 813
ENSMUST00000098686 Arid3b-002 protein_coding Mus_musculus 0 811
ENSMUST00000004780 Arid3b-201 protein_coding Mus_musculus 0 806
ENSMUST00000171444 Arid3b-001 protein_coding Mus_musculus 0 804
ENSMUST00000167670 Arid3b-004 retained_intron Mus_musculus 0 708
ENSMUST00000114165 Arid3b-005 nonsense_mediated_decay Mus_musculus 0 701
ENSMUST00000170477 Arid3b-007 protein_coding Mus_musculus 2e-23 115
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000004 58

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