C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 3B (BRIGHT-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098686 Arid3b-002 ENSMUSG00000004661 10090 - 9:57794687-57836793 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverMuscleENSMUST00000098686
Transcript ID Adipose Liver Muscle
ENSMUST00000098686 0.556±0.00 0.284±0.00 0.457±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000103470 arid3b-201 protein_coding Danio_rerio 0 320
ENST00000346246 ARID3B-001 protein_coding Homo_sapiens 0 1332
ENST00000448213 RP5-837I24.1-001 processed_pseudogene Homo_sapiens 0 1144
ENST00000566147 ARID3B-004 protein_coding Homo_sapiens 0 475
ENST00000566468 ARID3B-005 retained_intron Homo_sapiens 0 346
ENST00000569680 ARID3B-002 retained_intron Homo_sapiens 0 811
ENST00000622429 ARID3B-201 protein_coding Homo_sapiens 0 1332

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