C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stimulated by retinoic acid 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569936 STRA6-004 ENSG00000137868 9606 - 15:74182448-74203092 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverMuscleENST00000569936
Transcript ID Adipose Brain Colon Heart Liver Muscle
ENST00000569936 0.145±0.00 0.473±0.00 0.187±0.00 0.064±0.00 0.051±0.02 0.048±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0051180 IEA vitamin transport
GO:0051183 IEA vitamin transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167479 Stra6-201 protein_coding Mus_musculus 0 422
ENSMUST00000170397 Stra6-202 protein_coding Mus_musculus 0 422
ENSMUST00000034880 Stra6-002 protein_coding Mus_musculus 0 422
ENSMUST00000085677 Stra6-001 protein_coding Mus_musculus 0 422
ENSMUST00000136154 Stra6-012 protein_coding Mus_musculus 0 272
ENSMUST00000134955 Stra6-006 protein_coding Mus_musculus 0 261
ENSMUST00000150820 Stra6-009 protein_coding Mus_musculus 0 241
ENSMUST00000128378 Stra6-008 protein_coding Mus_musculus 0 239
ENSMUST00000147134 Stra6-007 protein_coding Mus_musculus 0 233
ENSMUST00000133287 Stra6-004 protein_coding Mus_musculus 9.80909e-45 185
ENSMUST00000145886 Stra6-003 retained_intron Mus_musculus 5.04467e-44 183
ENSMUST00000136338 Stra6-005 protein_coding Mus_musculus 8e-32 143

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