C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-sulfoglucosamine sulfohydrolase (sulfamidase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133507 Sgsh-002 ENSMUSG00000005043 10090 - 11:119346242-119355530 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000133507
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000133507 6.658±1.26 13.241±1.99 0.829±0.16 12.049±2.58 6.898±0.87 1.765±0.23 5.387±1.45 1.732±0.49 12.647±2.04 10.358±2.30 2.363±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031S CIL_00031S_0002 CGP 11:119288363-119345375
CIL_00042E CIL_00042E_0002 CGP 11:119307768-119355536
CIL_00042F CIL_00042F_0002 CGP 11:119343425-119381079

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326317 SGSH-001 protein_coding Homo_sapiens 0 1214
ENST00000570427 SGSH-017 protein_coding Homo_sapiens 0 217
ENST00000570923 SGSH-004 protein_coding Homo_sapiens 0 632
ENST00000571051 SGSH-009 retained_intron Homo_sapiens 9.94922e-44 180
ENST00000571675 SGSH-008 retained_intron Homo_sapiens 1.99965e-42 176
ENST00000572208 SGSH-011 processed_transcript Homo_sapiens 0 226
ENST00000572257 SGSH-015 protein_coding Homo_sapiens 0 573
ENST00000573150 SGSH-003 nonsense_mediated_decay Homo_sapiens 0 1406
ENST00000574505 SGSH-016 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000575282 SGSH-002 retained_intron Homo_sapiens 0 592
ENST00000576707 SGSH-005 protein_coding Homo_sapiens 0 289
ENST00000576856 SGSH-012 protein_coding Homo_sapiens 0 584
ENST00000576941 SGSH-010 nonsense_mediated_decay Homo_sapiens 0 316

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