C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MIS12 kinetochore complex component
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573759 MIS12-002 ENSG00000167842 9606 + 17:5486396-5490737 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000573759
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000573759 2.337±0.00 0.686±0.00 2.624±0.43 2.262±0.00 2.112±0.00 4.004±2.96 2.960±0.00 3.775±0.00 1.114±0.00 4.086±0.36 2.353±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FL CIL_0000FL_0001 CGP 17:5440912-5486811
CIL_0002PM CIL_0002PM_0001 CGP 17:5471251-5490814
CIL_0002G8 CIL_0002G8_0001 CGP 17:5486285-5619424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000444 IDA MIS12/MIND type complex
GO:0000775 IEA chromosome, centromeric region
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005829 TAS cytosol
GO:0007049 IEA cell cycle
GO:0007059 IMP chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0051382 IDA kinetochore assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048807 Mis12-001 protein_coding Mus_musculus 0 590
ENSMUST00000164220 Mis12-003 protein_coding Mus_musculus 0 590
ENSMUST00000037912 Ssh2-001 protein_coding Mus_musculus 0.000000005 68
ENSMUST00000074912 2010012O05Rik-201 protein_coding Mus_musculus 0.000000005 68

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