C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002G8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167842-ENSG00000091592 CGP 9606 17:5486285-5619424
GeneTranscriptPositionBiotype
ENSG00000072849 (DERL2)
derlin 2 		ENST00000158771 (DERL2-001) 5471251-5486217 protein_coding
ENST00000570848 (DERL2-008) 5474610-5486178 protein_coding
ENST00000571476 (DERL2-011) 5474727-5486148 nonsense_mediated_decay
ENST00000571968 (DERL2-004) 5482810-5486811 processed_transcript
ENST00000571971 (DERL2-009) 5480071-5486178 protein_coding
ENST00000572834 (DERL2-010) 5474452-5486162 protein_coding
ENST00000573547 (DERL2-013) 5474309-5480273 retained_intron
ENST00000573637 (DERL2-002) 5480400-5486165 nonsense_mediated_decay
ENST00000574700 (DERL2-005) 5480510-5486183 retained_intron
ENST00000574952 (DERL2-003) 5480124-5486276 nonsense_mediated_decay
ENST00000575209 (DERL2-006) 5482270-5486175 retained_intron
ENST00000575605 (DERL2-012) 5474610-5482879 protein_coding
ENST00000576551 (DERL2-007) 5477897-5486159 nonsense_mediated_decay
ENSG00000091592 (NLRP1)
NLR family, pyrin domain containing 1 		ENST00000262467 (NLRP1-001) 5501385-5584531 protein_coding
ENST00000269280 (NLRP1-010) 5514127-5584448 protein_coding
ENST00000345221 (NLRP1-201) 5514754-5584512 protein_coding
ENST00000354411 (NLRP1-012) 5514754-5583957 protein_coding
ENST00000544378 (NLRP1-002) 5499427-5584509 nonsense_mediated_decay
ENST00000568641 (NLRP1-004) 5499439-5501145 processed_transcript
ENST00000571307 (NLRP1-007) 5529895-5584512 processed_transcript
ENST00000571451 (NLRP1-008) 5514122-5584479 nonsense_mediated_decay
ENST00000572143 (NLRP1-013) 5584017-5619424 processed_transcript
ENST00000572272 (NLRP1-011) 5514754-5583957 protein_coding
ENST00000574406 (NLRP1-003) 5499428-5502963 processed_transcript
ENST00000574512 (NLRP1-005) 5502292-5518565 retained_intron
ENST00000576905 (NLRP1-014) 5583851-5619424 protein_coding
ENST00000577119 (NLRP1-009) 5514754-5583957 protein_coding
ENST00000613500 (NLRP1-202) 5501814-5584512 protein_coding
ENST00000617618 (NLRP1-203) 5514754-5584512 protein_coding
ENST00000619223 (NLRP1-204) 5514754-5584512 protein_coding
ENSG00000167842 (MIS12)
MIS12 kinetochore complex component 		ENST00000381165 (MIS12-001) 5486927-5490814 protein_coding
ENST00000573759 (MIS12-002) 5486396-5490737 protein_coding
ENST00000574186 (MIS12-005) 5486577-5487159 processed_transcript
ENST00000576570 (MIS12-004) 5486385-5488935 protein_coding
ENST00000576988 (MIS12-003) 5486285-5489237 protein_coding
ENST00000611091 (MIS12-201) 5486374-5490808 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0002G8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040599-ENSMUSG00000069830 CGP 10090 11:71019611-71144704
GeneTranscriptPositionBiotype
ENSMUSG00000018442 (Derl2)
Der1-like domain family, member 2 		ENSMUST00000018586 (Derl2-005) 71010351-71019269 nonsense_mediated_decay
ENSMUST00000108523 (Derl2-002) 71007164-71019242 protein_coding
ENSMUST00000131340 (Derl2-004) 71014566-71019212 nonsense_mediated_decay
ENSMUST00000132198 (Derl2-006) 71013122-71019275 nonsense_mediated_decay
ENSMUST00000140712 (Derl2-003) 71012122-71019243 retained_intron
ENSMUST00000143850 (Derl2-001) 71007442-71019303 protein_coding
ENSMUST00000171041 (Derl2-007) 71009933-71019841 protein_coding
ENSMUSG00000018451 (6330403K07Rik)
RIKEN cDNA 6330403K07 gene 		ENSMUST00000156068 (6330403K07Rik-001) 71031941-71033513 lincRNA
ENSMUSG00000040599 (Mis12)
MIS12 homolog (yeast) 		ENSMUST00000048807 (Mis12-001) 71019611-71027371 protein_coding
ENSMUST00000133413 (Mis12-004) 71019611-71025178 protein_coding
ENSMUST00000136137 (Mis12-006) 71019891-71025195 protein_coding
ENSMUST00000143762 (Mis12-002) 71019862-71025158 protein_coding
ENSMUST00000155236 (Mis12-005) 71019859-71025167 protein_coding
ENSMUST00000164220 (Mis12-003) 71019611-71026066 protein_coding
ENSMUSG00000069830 (Nlrp1a)
NLR family, pyrin domain containing 1A 		ENSMUST00000048514 (Nlrp1a-002) 71092236-71142366 protein_coding
ENSMUST00000108518 (Nlrp1a-001) 71092236-71144704 protein_coding
ENSMUSG00000083171 (Gm12321)
predicted gene 12321 		ENSMUST00000121485 (Gm12321-001) 71057166-71057969 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002G8_0001ENSG00000072849ENST00000158771ENST00000571476ENST00000571971ENST00000572834ENST00000573547ENSG00000091592ENST00000262467ENST00000269280ENST00000345221ENST00000354411ENST00000544378ENST00000568641ENST00000571307ENST00000571451ENST00000572272ENST00000574512ENST00000577119ENST00000613500ENST00000617618ENSG00000167842ENST00000381165ENST00000573759ENST00000611091CIL_0002G8_0002ENSMUSG00000018442ENSMUST00000018586ENSMUST00000108523ENSMUST00000132198ENSMUST00000140712ENSMUST00000143850ENSMUST00000171041ENSMUSG00000018451ENSMUST00000156068ENSMUSG00000040599ENSMUST00000048807ENSMUSG00000069830ENSMUST00000048514ENSMUST00000108518ENSMUSG00000083171ENSMUST00000121485
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072849 ENST00000158771 2.617±0.00 4.120±0.00 0.783±0.00 2.153±0.85 3.333±0.00 1.445±0.02 0.696±0.42 3.528±1.76 1.792±0.22 1.492±0.12 0.952±0.01 3.080±1.49 1.813±0.29 5.438±0.00
ENST00000570848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571476 N/A N/A N/A 6.513±0.00 N/A 8.728±0.00 4.401±0.00 7.514±0.00 N/A 10.094±0.00 5.616±0.00 9.131±0.00 N/A N/A
ENST00000571968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571971 9.962±0.00 N/A 3.723±0.00 N/A N/A N/A N/A 4.408±0.00 N/A N/A N/A 20.090±0.00 26.839±0.00 117.805±0.00
ENST00000572834 N/A N/A N/A N/A N/A N/A N/A N/A 14.641±0.00 N/A 4.928±0.00 N/A N/A N/A
ENST00000573547 N/A N/A N/A N/A 8.827±0.00 6.179±0.00 5.223±0.00 26.972±0.00 14.340±0.00 9.942±0.00 3.315±0.00 11.822±0.00 14.366±3.56 24.060±0.00
ENST00000573637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000091592 ENST00000262467 3.183±0.00 N/A N/A N/A 1.524±0.00 0.358±0.00 0.503±0.00 N/A N/A 1.987±0.06 N/A 1.225±0.00 1.421±0.23 N/A
ENST00000269280 2.125±0.00 N/A N/A N/A N/A 0.425±0.00 0.638±0.00 N/A 0.164±0.00 2.410±0.00 0.347±0.00 1.635±0.00 1.482±0.07 N/A
ENST00000345221 2.000±0.00 N/A N/A N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A
ENST00000354411 N/A N/A N/A N/A 1.273±0.00 N/A N/A 0.583±0.00 N/A 0.968±0.00 N/A N/A N/A N/A
ENST00000544378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.137±0.00
ENST00000568641 N/A N/A N/A 114.600±61.19 N/A 6.341±0.00 N/A 3.772±0.00 0.562±0.00 11.285±0.00 N/A 37.319±32.82 10.640±1.54 32.388±0.31
ENST00000571307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A
ENST00000571451 N/A 7.104±0.00 0.225±0.00 N/A 1.407±0.94 0.577±0.00 0.227±0.00 0.154±0.00 0.564±0.12 1.277±0.00 N/A 0.574±0.00 N/A N/A
ENST00000572143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572272 N/A 4.594±0.00 N/A N/A 0.889±0.31 0.775±0.00 0.480±0.08 N/A 0.433±0.00 N/A N/A 1.011±0.00 1.772±0.00 1.970±0.00
ENST00000574406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.00 N/A N/A
ENST00000576905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577119 N/A N/A 0.309±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.479±0.00 N/A N/A
ENST00000617618 1.797±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167842 ENST00000381165 N/A 3.781±0.00 N/A 4.191±0.00 2.703±0.00 N/A 0.288±0.00 0.603±0.00 N/A N/A 0.441±0.00 N/A N/A 6.432±0.00
ENST00000573759 2.337±0.00 N/A N/A 0.686±0.00 2.624±0.43 2.262±0.00 2.112±0.00 4.004±2.96 2.960±0.00 3.775±0.00 1.114±0.00 4.086±0.36 2.353±0.05 N/A
ENST00000574186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611091 N/A N/A N/A N/A 1.345±0.00 N/A N/A N/A 0.578±0.00 N/A N/A 2.766±1.30 2.195±0.00 10.444±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018442 ENSMUST00000018586 N/A 9.469±0.56 N/A N/A N/A 8.145±0.00 N/A N/A 28.460±5.02 N/A N/A N/A N/A 16.159±1.54
ENSMUST00000108523 N/A 6.469±1.52 N/A N/A N/A N/A 5.874±0.00 N/A 21.437±4.42 N/A N/A N/A N/A N/A
ENSMUST00000131340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132198 N/A N/A N/A N/A 12.387±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140712 1.316±0.23 1.412±0.28 N/A N/A 1.111±0.17 1.293±0.10 N/A N/A 3.822±0.13 2.064±0.31 N/A 0.983±0.09 N/A N/A
ENSMUST00000143850 3.724±0.44 4.314±1.69 8.455±1.01 7.615±4.56 2.717±0.95 3.331±0.76 2.554±0.51 5.404±1.04 10.949±2.51 4.896±1.27 2.198±0.27 3.785±2.59 7.691±3.21 3.188±0.34
ENSMUST00000171041 4.838±0.99 N/A N/A 4.167±0.00 3.222±0.00 N/A 4.095±0.88 4.305±0.38 8.927±2.01 N/A 2.655±0.55 11.784±1.59 19.502±7.87 10.747±2.66
ENSMUSG00000018451 ENSMUST00000156068 1.171±1.04 5.470±1.04 1.300±0.19 185.216±27.95 0.617±0.24 1.432±0.50 0.275±0.08 0.349±0.10 0.685±0.71 1.037±0.19 0.084±0.04 2.690±0.73 3.303±1.48 0.084±0.05
ENSMUSG00000040599 ENSMUST00000048807 3.414±1.08 1.394±0.00 6.618±0.09 7.896±0.18 2.963±0.77 2.302±0.09 1.818±0.28 3.215±0.77 11.515±3.99 4.091±0.41 1.224±0.33 3.211±0.41 7.999±2.91 2.608±0.64
ENSMUST00000133413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000069830 ENSMUST00000048514 N/A 0.011±0.00 N/A N/A 0.067±0.04 0.010±0.00 N/A N/A N/A N/A N/A 0.017±0.01 N/A N/A
ENSMUST00000108518 0.064±0.02 0.027±0.01 N/A 0.067±0.08 0.102±0.02 0.016±0.01 0.023±0.01 0.038±0.01 0.025±0.01 0.036±0.04 0.018±0.01 0.050±0.03 0.033±0.02 0.033±0.02
ENSMUSG00000083171 ENSMUST00000121485 0.045±0.00 N/A 0.008±0.00 N/A 0.086±0.03 N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 0.042±0.01

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