C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574224 ABCC1-002 ENSG00000103222 9606 + 16:16014540-16056561 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLungENST00000574224
Transcript ID Brain Kidney Lung
ENST00000574224 1.040±0.00 1.267±0.00 2.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MS CIL_0006MS_0001 CGP 16:15865720-16143074

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130671 Abcc1-010 nonsense_mediated_decay Mus_musculus 0 1206
ENSMUST00000147759 Abcc1-004 nonsense_mediated_decay Mus_musculus 0 1206
ENSMUST00000133454 Abcc1-003 nonsense_mediated_decay Mus_musculus 0 1206
ENSMUST00000100167 Abcc1-001 protein_coding Mus_musculus 0 1206
ENSMUST00000156089 Abcc1-002 retained_intron Mus_musculus 0 782

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