C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574822 CACNA1A-003 ENSG00000141837 9606 - 19:13229080-13253080 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000574822
Transcript ID Placenta
ENST00000574822 0.258±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122053 Cacna1a-002 protein_coding Mus_musculus 0 1018
ENSMUST00000121390 Cacna1a-001 protein_coding Mus_musculus 0 1018
ENSMUST00000141981 Cacna1a-008 retained_intron Mus_musculus 0 671
ENSMUST00000143215 Cacna1a-007 retained_intron Mus_musculus 0 505
ENSMUST00000153691 Cacna1a-010 processed_transcript Mus_musculus 0 431
ENSMUST00000144879 Cacna1a-005 retained_intron Mus_musculus 0 305

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