C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phospholipase D2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575246 PLD2-002 ENSG00000129219 9606 + 17:4807183-4818385 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENST00000575246
Transcript ID Brain Ovary
ENST00000575246 2.796±0.00 0.683±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RF CIL_0001RF_0001 CGP 17:4796144-4823434
CIL_0001RG CIL_0001RG_0001 CGP 17:4807096-4898061

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108557 Pld2-006 protein_coding Mus_musculus 0 1746
ENSMUST00000018429 Pld2-001 protein_coding Mus_musculus 0 1746
ENSMUST00000108556 Pld2-002 protein_coding Mus_musculus 0 712
ENSMUST00000179806 Pld2-007 retained_intron Mus_musculus 0 335

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